RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 LYNP07948 512 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 UQCRBP14927 111 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 CST5P28325 142 aaPredicted RBP7.81□□□□□ -1.16
CXCR4-201ENST00000241393 EPHA3P29320 983 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 THPOP40225 353 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 SERPINH1P50454 418 aaKnown RBP7.81□□□□□ -1.16
CXCR4-201ENST00000241393 NUDT2P50583 147 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 INHBCP55103 352 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 HUNKP57058 714 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 DSC1Q08554 894 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 CTBP1Q13363 440 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 LPIN1Q14693 890 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 PIGGQ5H8A4 983 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 TECRLQ5HYJ1 363 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 OGFRL1Q5TC84 451 aaPredicted RBP7.81□□□□□ -1.16
CXCR4-201ENST00000241393 BORAQ6PGQ7 559 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 HPS6Q86YV9 775 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 CEP97Q8IW35 865 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 MFSD6LQ8IWD5 586 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 DSELQ8IZU8 1212 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 NUP93Q8N1F7 819 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 ATP6V0D2Q8N8Y2 350 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 GLB1L3Q8NCI6 653 aaPredicted RBP7.81□□□□□ -1.16
CXCR4-201ENST00000241393 PYDC1Q8WXC3 89 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 TOP1MTQ969P6 601 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 ADAM2Q99965 735 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 OMDQ99983 421 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 FTHL17Q9BXU8 183 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 NUF2Q9BZD4 464 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 ZYG11BQ9C0D3 744 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 OR10A2Q9H208 303 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 MFSD1Q9H3U5 465 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 RETREG1Q9H6L5 497 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 WDR55Q9H6Y2 383 aaPredicted RBP7.81□□□□□ -1.16
CXCR4-201ENST00000241393 OLA1Q9NTK5 396 aaKnown RBP7.81□□□□□ -1.16
CXCR4-201ENST00000241393 COMMD8Q9NX08 183 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 ADAM29Q9UKF5 820 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 PLXNA3P51805 1871 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 TDRD15B5MCY1 1934 aaKnown RBP7.8□□□□□ -1.16
CXCR4-201ENST00000241393 MROH6A6NGR9 719 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 H3BNX3 289 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 SDHDO14521 159 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 AIM2O14862 343 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 SYN3O14994 580 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 MSI1O43347 362 aaKnown RBP7.8□□□□□ -1.16
CXCR4-201ENST00000241393 AP1G1O43747 822 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 AHCYL1O43865 530 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 IPO13O94829 963 aaKnown RBP7.8□□□□□ -1.16
CXCR4-201ENST00000241393 WISP3O95389 354 aaPredicted RBP7.8□□□□□ -1.16
CXCR4-201ENST00000241393 EPOP01588 193 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 CELA3BP08861 270 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 SAT1P21673 171 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 AVPR1AP37288 418 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 ATP4BP51164 291 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 TBX4P57082 545 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 YBEYP58557 167 aaPredicted RBP7.8□□□□□ -1.16
CXCR4-201ENST00000241393 ACVR1Q04771 509 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 DLG1Q12959 904 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 MED21Q13503 144 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 ART3Q13508 389 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 SQLEQ14534 574 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 C19orf54Q5BKX5 351 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 MARC1Q5VT66 337 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 GLB1LQ6UWU2 654 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 FAM43BQ6ZT52 329 aaPredicted RBP7.8□□□□□ -1.16
CXCR4-201ENST00000241393 C14orf80Q86SX3 495 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 PELI3Q8N2H9 469 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 PQLC1Q8N2U9 271 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 TXNDC5Q8NBS9 432 aaKnown RBP7.8□□□□□ -1.16
CXCR4-201ENST00000241393 KLHDC9Q8NEP7 349 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 GPR156Q8NFN8 814 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 ADAMTS17Q8TE56 1095 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 GDPD5Q8WTR4 605 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 HEXDCQ8WVB3 486 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 CCDC124Q96CT7 223 aaKnown RBP7.8□□□□□ -1.16
CXCR4-201ENST00000241393 BTN2A3PQ96KV6 586 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 UBXN10Q96LJ8 280 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 ASB2Q96Q27 587 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.8□□□□□ -1.16
CXCR4-201ENST00000241393 POMKQ9H5K3 350 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 MEAF6Q9HAF1 191 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 NMUR1Q9HB89 426 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 POPDC3Q9HBV1 291 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 SLC2A6Q9UGQ3 507 aa7.8□□□□□ -1.16
CXCR4-201ENST00000241393 LOC285095A0A1B0GVY8 99 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 DRGXA6NNA5 263 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 PRAMEF4O60810 478 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 BCAS2O75934 225 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 HLA-DPA1P20036 260 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 ME2P23368 584 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 SULT2A1Q06520 285 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 IL10RBQ08334 325 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 STX5Q13190 355 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 TRIP10Q15642 601 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 TRIM71Q2Q1W2 868 aaKnown RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 PARP15Q460N3 678 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 MS4A13Q5J8X5 152 aa7.79□□□□□ -1.16
CXCR4-201ENST00000241393 TCHHL1Q5QJ38 904 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 ZNF648Q5T619 568 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-201ENST00000241393 THEMIS2Q5TEJ8 643 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms