RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 ZNF382Q96SR6 550 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 WWOXQ9NZC7 414 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 PCYT1BQ9Y5K3 369 aaPredicted RBP14.89□□□□□ -0.03
HDHD3-201ENST00000238379 TBC1D3DA0A087WVF3 549 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 TBC1D3IA0A087WXS9 549 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 TBC1D3EA0A087X179 549 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 TBC1D3KA0A087X1G2 549 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 C17orf113A0A1B0GUU1 675 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 TBC1D3FA6NER0 549 aaPredicted RBP14.88□□□□□ -0.03
HDHD3-201ENST00000238379 TBC1D3LB9A6J9 549 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 OR7A17O14581 309 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 LIN7AO14910 233 aaPredicted RBP14.88□□□□□ -0.03
HDHD3-201ENST00000238379 CHUKO15111 745 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 POP7O75817 140 aaKnown RBP14.88□□□□□ -0.03
HDHD3-201ENST00000238379 HIST1H2AGP0C0S8 130 aaPredicted RBP14.88□□□□□ -0.03
HDHD3-201ENST00000238379 TBC1D3HP0C7X1 549 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 HIST1H2ADP20671 130 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 GGT5P36269 586 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 PKNOX1P55347 436 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 ABRQ12979 859 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 GTF2H2Q13888 395 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 RBBP7Q16576 425 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 TBC1D3GQ6DHY5 549 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 TBC1D3CQ6IPX1 549 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 GTF2H2CQ6P1K8 395 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 GPRIN3Q6ZVF9 776 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 TBC1D3Q8IZP1 549 aaPredicted RBP14.88□□□□□ -0.03
HDHD3-201ENST00000238379 TEX9Q8N6V9 391 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 OR52B6Q8NGF0 335 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 CEP70Q8NHQ1 597 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 MCOLN3Q8TDD5 553 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 ACTRT2Q8TDY3 377 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 KLHL29Q96CT2 875 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 HIST1H2AHQ96KK5 128 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 HIST1H2AJQ99878 128 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 H2AFJQ9BTM1 129 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 NOL11Q9H8H0 719 aaKnown RBP14.88□□□□□ -0.03
HDHD3-201ENST00000238379 CD93Q9NPY3 652 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 LNPEPQ9UIQ6 1025 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 NCKAP1Q9Y2A7 1128 aa14.88□□□□□ -0.03
HDHD3-201ENST00000238379 TCRBV21S2A2A0A5A6 115 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 DCXO43602 365 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 CCNT2O60583 730 aaKnown RBP14.87□□□□□ -0.03
HDHD3-201ENST00000238379 HNRNPCL1O60812 293 aaKnown RBP14.87□□□□□ -0.03
HDHD3-201ENST00000238379 CHRNB1P11230 501 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 ACADMP11310 421 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 GABRG2P18507 467 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 CYP2A7P20853 494 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 CALB2P22676 271 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 AP1S2P56377 157 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 ERVPABLB-1P60509 514 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 TMEM198Q66K66 360 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 NXNQ6DKJ4 435 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 DOK6Q6PKX4 331 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 CRTC3Q6UUV7 619 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 KIAA1324Q6UXG2 1013 aaKnown RBP14.87□□□□□ -0.03
HDHD3-201ENST00000238379 Q6ZS52 159 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 FAM124AQ86V42 546 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 CFAP206Q8IYR0 622 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 ZNF687Q8N1G0 1237 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 OR2L2Q8NH16 312 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 TWIST2Q8WVJ9 160 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 C19orf60Q96EN9 201 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 C3orf30Q96M34 536 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 LRMDAQ9H2I8 198 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 TUBB1Q9H4B7 451 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 ZNF385DQ9H6B1 395 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 WDR26Q9H7D7 661 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 IPPKQ9H8X2 491 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 KLC4Q9NSK0 619 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 OPTCQ9UBM4 332 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 DUSP12Q9UNI6 340 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 OR1A2Q9Y585 309 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 ST14Q9Y5Y6 855 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 MGAT4DA6NG13 374 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 ARHGEF33A8MVX0 844 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 H3BM21 787 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 K7EPI3 171 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 MYO1CO00159 1063 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 STK16O75716 305 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 OR4F21O95013 312 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 ENO1P06733 434 aaKnown RBP14.87□□□□□ -0.03
HDHD3-201ENST00000238379 HNMTP50135 292 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 RASSF2P50749 326 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 PPP2CBP62714 309 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 PPP2CAP67775 309 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 SFSWAPQ12872 951 aaKnown RBP14.87□□□□□ -0.03
HDHD3-201ENST00000238379 TRAF3Q13114 568 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.87□□□□□ -0.03
HDHD3-201ENST00000238379 TTC23LQ6PF05 361 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 ZNF852Q6ZMS4 543 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 TCAIMQ8N3R3 496 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 CPSF7Q8N684 471 aaKnown RBP14.87□□□□□ -0.03
HDHD3-201ENST00000238379 ASB12Q8WXK4 309 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 ARHGEF3Q9NR81 526 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 PRKAB1Q9Y478 270 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 TIMM22Q9Y584 194 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 CAPN7Q9Y6W3 813 aa14.87□□□□□ -0.03
HDHD3-201ENST00000238379 KRT87PA6NCN2 255 aa14.86□□□□□ -0.03
HDHD3-201ENST00000238379 GIPC1O14908 333 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms