RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 LIN7AO14910 233 aaPredicted RBP13.36□□□□□ -0.27
VEGFA-201ENST00000230480 CAPN5O15484 640 aaPredicted RBP13.36□□□□□ -0.27
VEGFA-201ENST00000230480 EFSO43281 561 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 HAUS5O94927 633 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 OGNP20774 298 aaKnown RBP13.36□□□□□ -0.27
VEGFA-201ENST00000230480 FMO4P31512 558 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 SLC1A2P43004 574 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 MAPK9P45984 424 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 CAPZBP47756 277 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 TTPAP49638 278 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 PGGT1BP53609 377 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 MPP1Q00013 466 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 TRA2AQ13595 282 aaKnown RBP eCLIP13.36□□□□□ -0.272e-8■□□□□ 9.9
VEGFA-201ENST00000230480 CRYMQ14894 314 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 BBS9Q3SYG4 887 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 CCSMST1Q4G0I0 132 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 PHF19Q5T6S3 580 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 FBXO38Q6PIJ6 1188 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 CNSTQ6PJW8 725 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 RBM12BQ8IXT5 1001 aaKnown RBP13.36□□□□□ -0.27
VEGFA-201ENST00000230480 ZFPM2Q8WW38 1151 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 KLHL6Q8WZ60 621 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 TFGQ92734 400 aaPredicted RBP13.36□□□□□ -0.27
VEGFA-201ENST00000230480 FGF11Q92914 225 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 TCF12Q99081 682 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 APMAPQ9HDC9 416 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 FBXO6Q9NRD1 293 aaPredicted RBP13.36□□□□□ -0.27
VEGFA-201ENST00000230480 SMYD2Q9NRG4 433 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 CRYL1Q9Y2S2 319 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 HEATR5BQ9P2D3 2071 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 ATRXP46100 2492 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 IGHV5-51A0A0C4DH38 117 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 FAM187AA6NFU0 413 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 EFCAB8A8MWE9 144 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 TMX2-CTNND1H3BSU7 103 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 HGSO14964 777 aaPredicted RBP13.35□□□□□ -0.27
VEGFA-201ENST00000230480 DUX1O43812 170 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 PRAMEF10O60809 474 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 ITGA2BP08514 1039 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 GSTM1P09488 218 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 ANKRD34CP0C6C1 535 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 SLC35G4P0C7Q5 338 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 OR56A5P0C7T3 313 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 ERVK-10P10266 1014 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 PGAM1P18669 254 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 PEBP1P30086 187 aaKnown RBP13.35□□□□□ -0.27
VEGFA-201ENST00000230480 SLC5A2P31639 672 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 HALP42357 657 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 CLCN7P51798 805 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 KPNA2P52292 529 aaKnown RBP13.35□□□□□ -0.27
VEGFA-201ENST00000230480 CSE1LP55060 971 aaKnown RBP13.35□□□□□ -0.27
VEGFA-201ENST00000230480 ERVPABLB-1P60509 514 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 SH3BP2P78314 561 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 GSTM4Q03013 218 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 PRKG2Q13237 762 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 SRSF6Q13247 344 aaKnown RBP13.35□□□□□ -0.27
VEGFA-201ENST00000230480 HSP90AA5PQ58FG0 334 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 SNAP47Q5SQN1 464 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 CASC4Q6P4E1 433 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 CYHR1Q6ZMK1 362 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 PCGF5Q86SE9 256 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 CNTN4Q8IWV2 1026 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 TRIM48Q8IWZ4 208 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 ADGRF3Q8IZF5 1079 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 NOA1Q8NC60 698 aaKnown RBP13.35□□□□□ -0.27
VEGFA-201ENST00000230480 ACVR1CQ8NER5 493 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 OR52E1Q8NGJ3 308 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 SEC14L1Q92503 715 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 USP7Q93009 1102 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 SNF8Q96H20 258 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 ZNF578Q96N58 590 aaPredicted RBP13.35□□□□□ -0.27
VEGFA-201ENST00000230480 RUNDC3BQ96NL0 473 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 MCMBPQ9BTE3 642 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 LRRC1Q9BTT6 524 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 DPH5Q9H2P9 285 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 EPB41L1Q9H4G0 881 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 TFB2MQ9H5Q4 396 aaKnown RBP13.35□□□□□ -0.27
VEGFA-201ENST00000230480 XKR8Q9H6D3 395 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 MOCS1Q9NZB8 636 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 PISDQ9UG56 409 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 KLHL3Q9UH77 587 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 FBXO5Q9UKT4 447 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 ACSL6Q9UKU0 697 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 ICKQ9UPZ9 632 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 RUVBL2Q9Y230 463 aaKnown RBP13.35□□□□□ -0.27
VEGFA-201ENST00000230480 PCDHGA7Q9Y5G6 932 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 NFS1Q9Y697 457 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 MAD1L1Q9Y6D9 718 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 LOC400499M0QZD8 3231 aa13.35□□□□□ -0.27
VEGFA-201ENST00000230480 FAM208BQ5VWN6 2430 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 OR5K3A6NET4 321 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 NVLO15381 856 aaKnown RBP13.34□□□□□ -0.27
VEGFA-201ENST00000230480 AHSGP02765 367 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 FTH1P02794 183 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 ABCG1P45844 678 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 EIF3BP55884 814 aaKnown RBP13.34□□□□□ -0.27
VEGFA-201ENST00000230480 HSPA14Q0VDF9 509 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 EIF3IQ13347 325 aaKnown RBP13.34□□□□□ -0.27
VEGFA-201ENST00000230480 TGIF1Q15583 401 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 LONRF1Q17RB8 773 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms