RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 FAM162AQ96A26 154 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 GAD1Q99259 594 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 GPR21Q99679 349 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 ADARB2Q9NS39 739 aaKnown RBP13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 INVSQ9Y283 1065 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 HSPE1-MOB4S4R3N1 261 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 TTC3P53804 2025 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 IL1RNP18510 177 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 PSMB9P28065 219 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 MVKQ03426 396 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 PLA2G4EQ3MJ16 856 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 LRIT3Q3SXY7 679 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 PRAMEF19Q5SWL8 479 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 CAPN13Q6MZZ7 669 aaPredicted RBP13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 CDKN2AIPNLQ96HQ2 116 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 ITCHQ96J02 903 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 CDK15Q96Q40 435 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 MOV10Q9HCE1 1003 aaKnown RBP13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 PRDM5Q9NQX1 630 aaPredicted RBP13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 TMLHEQ9NVH6 421 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 TESMINQ9Y4I5 508 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 RFPL2O75678 378 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 GJB3O75712 270 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 MT-ND2P03891 347 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 GSNP06396 782 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 RHOQP17081 205 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 TCEA1P23193 301 aaKnown RBP13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 SCNN1GP51170 649 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 HUNKP57058 714 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 DGCR6Q14129 220 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 SCD5Q86SK9 330 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 MSRB3Q8IXL7 192 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 LPPQ93052 612 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 TINF2Q9BSI4 451 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 THUMPD3Q9BV44 507 aaKnown RBP13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 ABHD16BQ9H3Z7 469 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 ACOT13Q9NPJ3 140 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 POLR3HQ9Y535 204 aaPredicted RBP13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 NOX1Q9Y5S8 564 aa13.75□□□□□ -0.21
SCNN1A-201ENST00000228916 CASTOR2A6NHX0 329 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 MITFO75030 526 aaPredicted RBP13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 EPOP01588 193 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 BMP1P13497 986 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 TGFBR2P37173 567 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 FCGRTP55899 365 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 FPGSQ05932 587 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 KEAP1Q14145 624 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 GBX1Q14549 363 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 MFSD10Q14728 455 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 TRIP4Q15650 581 aaPredicted RBP13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 ZNF181Q2M3W8 571 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 PAN2Q504Q3 1202 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 TIGD5Q53EQ6 642 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 TUBA3EQ6PEY2 450 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 HTRA1Q92743 480 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 RPL3LQ92901 407 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 PKMYT1Q99640 499 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 CLSTN3Q9BQT9 956 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 KAT8Q9H7Z6 458 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 TMEM248Q9NWD8 314 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 SCN3BQ9NY72 215 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 SLC25A37Q9NYZ2 338 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 ERVW-1Q9UQF0 538 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 SAGE2PA6NJ88 616 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 CLDN24A6NM45 220 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 RGS13O14921 159 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 MRPS14O60783 128 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 KCNK2O95069 426 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 CAPN1P07384 714 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 IGFBP5P24593 272 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 NR6A1Q15406 480 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 AP5B1Q2VPB7 878 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 RFTN2Q52LD8 501 aaPredicted RBP13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 SHQ1Q6PI26 577 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 IL27RAQ6UWB1 636 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 CCDC81Q6ZN84 652 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 CYP4Z1Q86W10 505 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 MMAAQ8IVH4 418 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 MICU2Q8IYU8 434 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 MCFD2Q8NI22 146 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 METTL6Q8TCB7 284 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 YME1L1Q96TA2 773 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 SEMA3CQ99985 751 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 ACBD6Q9BR61 282 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 GABARAPL1Q9H0R8 117 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 ABCB10Q9NRK6 738 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 U3KQV3 271 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 PATJQ8NI35 1801 aa13.74□□□□□ -0.21
SCNN1A-201ENST00000228916 TAF4O00268 1085 aa13.73□□□□□ -0.21
SCNN1A-201ENST00000228916 CREG1O75629 220 aa13.73□□□□□ -0.21
SCNN1A-201ENST00000228916 PIRTP0C851 137 aa13.73□□□□□ -0.21
SCNN1A-201ENST00000228916 HOXB6P17509 224 aaKnown RBP13.73□□□□□ -0.21
SCNN1A-201ENST00000228916 BMPR1AP36894 532 aa13.73□□□□□ -0.21
SCNN1A-201ENST00000228916 CRYBB1P53674 252 aaPredicted RBP13.73□□□□□ -0.21
SCNN1A-201ENST00000228916 GALNT3Q14435 633 aa13.73□□□□□ -0.21
SCNN1A-201ENST00000228916 CLPPQ16740 277 aaPredicted RBP13.73□□□□□ -0.21
SCNN1A-201ENST00000228916 NANOGNBQ7Z5D8 188 aa13.73□□□□□ -0.21
SCNN1A-201ENST00000228916 GPSM1Q86YR5 675 aa13.73□□□□□ -0.21
SCNN1A-201ENST00000228916 NLGN2Q8NFZ4 835 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms