RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 KCNH4Q9UQ05 1017 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 LAMB4A4D0S4 1761 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 IGKV6D-21A0A0A0MT36 114 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 SNAI1O95863 264 aaPredicted RBP13.51□□□□□ -0.25
NFKB1-201ENST00000226574 ANXA4P09525 319 aaPredicted RBP13.51□□□□□ -0.25
NFKB1-201ENST00000226574 PROZP22891 400 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 ELAVL2Q12926 359 aaKnown RBP13.51□□□□□ -0.25
NFKB1-201ENST00000226574 MYBPC3Q14896 1274 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 PCBP1Q15365 356 aaKnown RBP eCLIP13.51□□□□□ -0.25
NFKB1-201ENST00000226574 ERAP2Q6P179 960 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 KRTCAP2Q8N6L1 136 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 XAGE5Q8WWM1 108 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 OSBPL2Q9H1P3 480 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 USP22Q9UPT9 525 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 KIAA0100Q14667 2235 aaKnown RBP13.51□□□□□ -0.25
NFKB1-201ENST00000226574 KIF13AQ9H1H9 1805 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 SCAMP1O15126 338 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 CLDN11O75508 207 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 PCDH8O95206 1070 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 FABP3P05413 133 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 HPCAL1P37235 193 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 RAB25P57735 213 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 PLA2G4EQ3MJ16 856 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 SETMARQ53H47 684 aaPredicted RBP13.51□□□□□ -0.25
NFKB1-201ENST00000226574 SMG8Q8ND04 991 aaKnown RBP13.51□□□□□ -0.25
NFKB1-201ENST00000226574 KBTBD8Q8NFY9 601 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 KCTD13Q8WZ19 329 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 IRGQQ8WZA9 623 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 GFM1Q96RP9 751 aaKnown RBP13.51□□□□□ -0.25
NFKB1-201ENST00000226574 SGK2Q9HBY8 427 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 C1orf109Q9NX04 203 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 GIN1Q9NXP7 522 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 SLAMF8Q9P0V8 285 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 GTF2A1LQ9UNN4 478 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 GPC6Q9Y625 555 aaPredicted RBP13.51□□□□□ -0.25
NFKB1-201ENST00000226574 ARID1AO14497 2285 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 A0A0G2JN53 185 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 LOC100130705A0A1B0GUX0 176 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 MAFKO60675 156 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 KERAO60938 352 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 TULP3O75386 442 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 AP2A2O94973 939 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 PGRP06401 933 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 VARSP26640 1264 aaKnown RBP13.51□□□□□ -0.25
NFKB1-201ENST00000226574 HOXD10P28358 340 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 CDKN1CP49918 316 aaPredicted RBP13.51□□□□□ -0.25
NFKB1-201ENST00000226574 NKX2-5P52952 324 aaPredicted RBP13.51□□□□□ -0.25
NFKB1-201ENST00000226574 OR4D1Q15615 310 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 CYP2A13Q16696 494 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 TIMM50Q3ZCQ8 353 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 PGM2L1Q6PCE3 622 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 ISCA2Q86U28 154 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 OR4A15Q8NGL6 344 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 BBS4Q96RK4 519 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 EMILIN2Q9BXX0 1053 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 KAT8Q9H7Z6 458 aaKnown RBP13.51□□□□□ -0.25
NFKB1-201ENST00000226574 CLN6Q9NWW5 311 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 SLC9A8Q9Y2E8 581 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 RNF11Q9Y3C5 154 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 ARIH1Q9Y4X5 557 aaPredicted RBP13.51□□□□□ -0.25
NFKB1-201ENST00000226574 PCDHGB5Q9Y5G0 923 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 KCNE2Q9Y6J6 123 aa13.51□□□□□ -0.25
NFKB1-201ENST00000226574 GABRDO14764 452 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 PPP2R1BP30154 601 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 SCNN1AP37088 669 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 HTR6P50406 440 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 APLP1P51693 650 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 SLC13A2Q13183 592 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 USP39Q53GS9 565 aaKnown RBP13.5□□□□□ -0.25
NFKB1-201ENST00000226574 PAGE3Q5JUK9 113 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 FNDC8Q8TC99 324 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 ZNF696Q9H7X3 374 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 TRIM45Q9H8W5 580 aaPredicted RBP13.5□□□□□ -0.25
NFKB1-201ENST00000226574 CLPXO76031 633 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 S1PR4O95977 384 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 CDH1P12830 882 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 HCAR3P49019 387 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 BTG3Q14201 252 aaPredicted RBP13.5□□□□□ -0.25
NFKB1-201ENST00000226574 CES5AQ6NT32 575 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 MBOAT1Q6ZNC8 495 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 ZNF467Q7Z7K2 595 aaPredicted RBP13.5□□□□□ -0.25
NFKB1-201ENST00000226574 ZBTB2Q8N680 514 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 OR5AK3PQ8NH89 298 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 C11orf16Q9NQ32 467 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 PCDHB3Q9Y5E6 796 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 TJP1Q07157 1748 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 GABRB3P28472 473 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 NOS3P29474 1203 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 TALDO1P37837 337 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 GRIA2P42262 883 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 CENPAP49450 140 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 EEFSECP57772 596 aaKnown RBP13.5□□□□□ -0.25
NFKB1-201ENST00000226574 SMARCB1Q12824 385 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 ANKDD1AQ495B1 522 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 MS4A13Q5J8X5 152 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 FAM131AQ6UXB0 335 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 SYVN1Q86TM6 617 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 ARL14EPQ8N8R7 260 aaPredicted RBP13.5□□□□□ -0.25
NFKB1-201ENST00000226574 PTERQ96BW5 349 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 YME1L1Q96TA2 773 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms