RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 CYP4F3Q08477 520 aa12.19□□□□□ -0.46
NUP88-201ENST00000225696 SIM2Q14190 667 aaPredicted RBP12.19□□□□□ -0.46
NUP88-201ENST00000225696 PON2Q15165 354 aa12.19□□□□□ -0.46
NUP88-201ENST00000225696 MAPK11Q15759 364 aa12.19□□□□□ -0.46
NUP88-201ENST00000225696 CCL15Q16663 113 aa12.19□□□□□ -0.46
NUP88-201ENST00000225696 SPANXN4Q5MJ08 99 aa12.19□□□□□ -0.46
NUP88-201ENST00000225696 NADSYN1Q6IA69 706 aa12.19□□□□□ -0.46
NUP88-201ENST00000225696 GCNT7Q6ZNI0 430 aa12.19□□□□□ -0.46
NUP88-201ENST00000225696 USP50Q70EL3 339 aaPredicted RBP12.19□□□□□ -0.46
NUP88-201ENST00000225696 GLT6D1Q7Z4J2 308 aa12.19□□□□□ -0.46
NUP88-201ENST00000225696 GOLGA7Q7Z5G4 137 aa12.19□□□□□ -0.46
NUP88-201ENST00000225696 CYP4Z1Q86W10 505 aa12.19□□□□□ -0.46
NUP88-201ENST00000225696 OR7D4Q8NG98 312 aa12.19□□□□□ -0.46
NUP88-201ENST00000225696 NETO1Q8TDF5 533 aa12.19□□□□□ -0.46
NUP88-201ENST00000225696 ZNF641Q96N77 438 aaPredicted RBP12.19□□□□□ -0.46
NUP88-201ENST00000225696 PDFQ9HBH1 243 aa12.19□□□□□ -0.46
NUP88-201ENST00000225696 ZFP14Q9HCL3 533 aa12.19□□□□□ -0.46
NUP88-201ENST00000225696 SCUBE2Q9NQ36 999 aa12.19□□□□□ -0.46
NUP88-201ENST00000225696 FNIP2Q9P278 1114 aa12.19□□□□□ -0.46
NUP88-201ENST00000225696 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.19□□□□□ -0.46
NUP88-201ENST00000225696 CXCR6O00574 342 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 AREL1O15033 823 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 NDST3O95803 873 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 SERPINF2P08697 491 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 PKMP14618 531 aaKnown RBP12.18□□□□□ -0.46
NUP88-201ENST00000225696 ACVR2AP27037 513 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 HOXC8P31273 242 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 CD52P31358 61 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 MASP1P48740 699 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 GABARAPL2P60520 117 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 IL2P60568 153 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 OCA2Q04671 838 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 GBX1Q14549 363 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 INAQ16352 499 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 GPR162Q16538 588 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 CARTPTQ16568 116 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 LDLRAD1Q5T700 205 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 B3GNT8Q7Z7M8 397 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 MON1AQ86VX9 555 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 OR7A2PQ8NGA2 310 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 OR8J3Q8NGG0 315 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 MCOLN3Q8TDD5 553 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 SLC13A3Q8WWT9 602 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 UBE2FQ969M7 185 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 FAM162AQ96A26 154 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 CCDC115Q96NT0 180 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 RBM4BQ9BQ04 359 aaKnown RBP12.18□□□□□ -0.46
NUP88-201ENST00000225696 CORO1BQ9BR76 489 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 RBM4Q9BWF3 364 aaKnown RBP12.18□□□□□ -0.46
NUP88-201ENST00000225696 UGT2B28Q9BY64 529 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 HMG20AQ9NP66 347 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 GIN1Q9NXP7 522 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 USE1Q9NZ43 259 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 VPS51Q9UID3 782 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 TRMT6Q9UJA5 497 aaKnown RBP12.18□□□□□ -0.46
NUP88-201ENST00000225696 PCDHGC4Q9Y5F7 938 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 PCDHGA10Q9Y5H3 936 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 SNX5Q9Y5X3 404 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 CNOT3O75175 753 aaKnown RBP12.18□□□□□ -0.46
NUP88-201ENST00000225696 E2F6O75461 281 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 GABARAPO95166 117 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 GUCA1CO95843 209 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 EPOP01588 193 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 GSNP06396 782 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 CA5AP35218 305 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 PHC1P78364 1004 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 PURAQ00577 322 aaKnown RBP12.18□□□□□ -0.46
NUP88-201ENST00000225696 IL5RAQ01344 420 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 SGO1Q5FBB7 561 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 VARS2Q5ST30 1063 aaKnown RBP12.18□□□□□ -0.46
NUP88-201ENST00000225696 CEP68Q76N32 757 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 NKAPQ8N5F7 415 aaKnown RBP12.18□□□□□ -0.46
NUP88-201ENST00000225696 PEX13Q92968 403 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 GLMNQ92990 594 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 ITPKCQ96DU7 683 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 NSUN3Q9H649 340 aaKnown RBP12.18□□□□□ -0.46
NUP88-201ENST00000225696 ZNF408Q9H9D4 720 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 ATAD3AQ9NVI7 634 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 SLCO3A1Q9UIG8 710 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 INTS6Q9UL03 887 aaKnown RBP12.18□□□□□ -0.46
NUP88-201ENST00000225696 PNMA8BQ9ULN7 279 aaPredicted RBP12.18□□□□□ -0.46
NUP88-201ENST00000225696 SCML2Q9UQR0 700 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 PCDHB14Q9Y5E9 798 aa12.18□□□□□ -0.46
NUP88-201ENST00000225696 GREB1Q4ZG55 1949 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 ELOVL7A1L3X0 281 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 DYTNA2CJ06 578 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 DRGXA6NNA5 263 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 DIRAS1O95057 198 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 SERPINA1P01009 418 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 HOXD9P28356 352 aaPredicted RBP12.17□□□□□ -0.46
NUP88-201ENST00000225696 MC4RP32245 332 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 KCNQ1P51787 676 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 TRAF3Q13114 568 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 CARD16Q5EG05 197 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 GDF6Q6KF10 455 aaPredicted RBP12.17□□□□□ -0.46
NUP88-201ENST00000225696 AFTPHQ6ULP2 937 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 SUSD1Q6UWL2 747 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 CCDC81Q6ZN84 652 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 MILR1Q7Z6M3 343 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 GALNT10Q86SR1 603 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 501.7 ms