RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 FBXO6Q9NRD1 293 aaPredicted RBP12.36□□□□□ -0.43
LSM5-201ENST00000223084 IARS2Q9NSE4 1012 aaKnown RBP12.36□□□□□ -0.43
LSM5-201ENST00000223084 OCIAD1Q9NX40 245 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 PDP2Q9P2J9 529 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 GNPTGQ9UJJ9 305 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 PCDHGA8Q9Y5G5 932 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 HEBP2Q9Y5Z4 205 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 COLEC10Q9Y6Z7 277 aa12.36□□□□□ -0.43
LSM5-201ENST00000223084 OR6C74A6NCV1 312 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 F8W8V4 182 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 HGSO14964 777 aaPredicted RBP12.35□□□□□ -0.43
LSM5-201ENST00000223084 NIPSNAP2O75323 286 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 GPC4O75487 556 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 ERVK-10P10266 1014 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 CAPZBP47756 277 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 ARL4CP56559 192 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 MPP1Q00013 466 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 CKAP4Q07065 602 aaKnown RBP12.35□□□□□ -0.43
LSM5-201ENST00000223084 FASTKD3Q14CZ7 662 aaKnown RBP12.35□□□□□ -0.43
LSM5-201ENST00000223084 TRADDQ15628 312 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 HSP90AA5PQ58FG0 334 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 RNF187Q5TA31 235 aaPredicted RBP12.35□□□□□ -0.43
LSM5-201ENST00000223084 DUPD1Q68J44 220 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 IRGCQ6NXR0 463 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 FAM92BQ6ZTR7 304 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 ARHGAP22Q7Z5H3 698 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 KCNMB4Q86W47 210 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 LRRC6Q86X45 466 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 PLXDC1Q8IUK5 500 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 ANKMY2Q8IV38 441 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 LSMEM2Q8N112 164 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 PDIK1LQ8N165 341 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 OR5AR1Q8NGP9 310 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 FGF11Q92914 225 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 TMEM159Q96B96 161 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 NAF1Q96HR8 494 aaKnown RBP12.35□□□□□ -0.43
LSM5-201ENST00000223084 DCBLD2Q96PD2 775 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 TCF12Q99081 682 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 HGH1Q9BTY7 390 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 TSSK1BQ9BXA7 367 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 XKR8Q9H6D3 395 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 PLAC1Q9HBJ0 212 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 GRHL1Q9NZI5 618 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 SLC17A6Q9P2U8 582 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 GALPQ9UBC7 116 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 FBXO5Q9UKT4 447 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 CDYLQ9Y232 598 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 ASF1AQ9Y294 204 aa12.35□□□□□ -0.43
LSM5-201ENST00000223084 SETXQ7Z333 2677 aaKnown RBP12.35□□□□□ -0.43
LSM5-201ENST00000223084 MN1Q10571 1320 aaPredicted RBP12.35□□□□□ -0.43
LSM5-201ENST00000223084 EFCAB7A8K855 629 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 CDRT15L2A8MXV6 281 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 SMAPO00193 183 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 PFDN6O15212 129 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 C9P02748 559 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 APOA4P06727 396 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 ITGA2BP08514 1039 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 FGF3P11487 239 aaPredicted RBP12.34□□□□□ -0.43
LSM5-201ENST00000223084 NDUFS1P28331 727 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 SLC5A2P31639 672 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 CSTF2P33240 577 aaKnown RBP eCLIP12.34□□□□□ -0.43
LSM5-201ENST00000223084 SEPHS1P49903 392 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 SLC7A5Q01650 507 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 ABRQ12979 859 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 PDIA2Q13087 525 aaKnown RBP12.34□□□□□ -0.43
LSM5-201ENST00000223084 WHAMMP3Q1A5X7 153 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 SPANXN3Q5MJ09 141 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 ZNF549Q6P9A3 640 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 CNSTQ6PJW8 725 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 IGF2-ASQ6U949 168 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 UNC5AQ6ZN44 842 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 FAM129CQ86XR2 697 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 SLC22A15Q8IZD6 547 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 AGBL5Q8NDL9 886 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 ACVR1CQ8NER5 493 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 OR52E1Q8NGJ3 308 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 CFAP61Q8NHU2 1237 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 ZFPM2Q8WW38 1151 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 LCN9Q8WX39 176 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 USP7Q93009 1102 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 PMEPA1Q969W9 287 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 C9orf72Q96LT7 481 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 ZNF578Q96N58 590 aaPredicted RBP12.34□□□□□ -0.43
LSM5-201ENST00000223084 PANX3Q96QZ0 392 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 MVB12BQ9H7P6 319 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 THSD1Q9NS62 852 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 INTS10Q9NVR2 710 aaKnown RBP12.34□□□□□ -0.43
LSM5-201ENST00000223084 AKAP7Q9P0M2 348 aaPredicted RBP12.34□□□□□ -0.43
LSM5-201ENST00000223084 WHRNQ9P202 907 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 ZC3H7BQ9UGR2 993 aaKnown RBP12.34□□□□□ -0.43
LSM5-201ENST00000223084 TSR3Q9UJK0 312 aaKnown RBP12.34□□□□□ -0.43
LSM5-201ENST00000223084 PLAGL1Q9UM63 463 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 TDRKHQ9Y2W6 561 aaKnown RBP12.34□□□□□ -0.43
LSM5-201ENST00000223084 TEX264Q9Y6I9 313 aa12.34□□□□□ -0.43
LSM5-201ENST00000223084 OR5K3A6NET4 321 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 C9orf172C9J069 976 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 PRAMEF10O60809 474 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 RASSF9O75901 435 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 HAUS5O94927 633 aa12.33□□□□□ -0.44
LSM5-201ENST00000223084 SLCO2B1O94956 709 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms