RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 INPPL1O15357 1258 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 VARSP26640 1264 aaKnown RBP13.34□□□□□ -0.27
RAB3D-201ENST00000222120 ALDH4A1P30038 563 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 OXTRP30559 389 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 MPPE1Q53F39 396 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 FAM9CQ8IZT9 166 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 ZNF419Q96HQ0 510 aaPredicted RBP13.34□□□□□ -0.27
RAB3D-201ENST00000222120 NSMCE3Q96MG7 304 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 RNF38Q9H0F5 515 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 C1orf109Q9NX04 203 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 GMPPBQ9Y5P6 360 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 CXCR6O00574 342 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 SMAD6O43541 496 aaKnown RBP13.34□□□□□ -0.27
RAB3D-201ENST00000222120 CAPN15O75808 1086 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 SERPINA1P01009 418 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 PABPC4LP0CB38 370 aaKnown RBP13.34□□□□□ -0.27
RAB3D-201ENST00000222120 CAPGP40121 348 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 RPS14P62263 151 aaKnown RBP13.34□□□□□ -0.27
RAB3D-201ENST00000222120 PERM1Q5SV97 790 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 ZC3H7AQ8IWR0 971 aaKnown RBP13.34□□□□□ -0.27
RAB3D-201ENST00000222120 CMTR2Q8IYT2 770 aaKnown RBP13.34□□□□□ -0.27
RAB3D-201ENST00000222120 SH3RF2Q8TEC5 729 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 SCAMP4Q969E2 229 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 DNAAF2Q9NVR5 837 aaKnown RBP13.34□□□□□ -0.27
RAB3D-201ENST00000222120 LOC285095A0A1B0GVY8 99 aa13.33□□□□□ -0.27
RAB3D-201ENST00000222120 C8AP07357 584 aa13.33□□□□□ -0.27
RAB3D-201ENST00000222120 GNAO1P09471 354 aa13.33□□□□□ -0.27
RAB3D-201ENST00000222120 CYP4F2P78329 520 aa13.33□□□□□ -0.27
RAB3D-201ENST00000222120 CMPK2Q5EBM0 449 aa13.33□□□□□ -0.27
RAB3D-201ENST00000222120 SULT1C3Q6IMI6 304 aa13.33□□□□□ -0.27
RAB3D-201ENST00000222120 LETMD1Q6P1Q0 360 aa13.33□□□□□ -0.27
RAB3D-201ENST00000222120 BLOC1S3Q6QNY0 202 aa13.33□□□□□ -0.27
RAB3D-201ENST00000222120 TMPRSS11BQ86T26 416 aa13.33□□□□□ -0.27
RAB3D-201ENST00000222120 TSPAN33Q86UF1 283 aa13.33□□□□□ -0.27
RAB3D-201ENST00000222120 OR52J3Q8NH60 311 aa13.33□□□□□ -0.27
RAB3D-201ENST00000222120 ITCHQ96J02 903 aa13.33□□□□□ -0.27
RAB3D-201ENST00000222120 FAM83DQ9H4H8 585 aa13.33□□□□□ -0.27
RAB3D-201ENST00000222120 RIMS3Q9UJD0 308 aa13.33□□□□□ -0.27
RAB3D-201ENST00000222120 PCDH8O95206 1070 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 GPX3P22352 226 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 GPC1P35052 558 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 NSG1P42857 185 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 RFTN2Q52LD8 501 aaPredicted RBP13.33□□□□□ -0.28
RAB3D-201ENST00000222120 LRRC66Q68CR7 880 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 UGT2A3Q6UWM9 527 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 RSPO2Q6UXX9 243 aaPredicted RBP13.33□□□□□ -0.28
RAB3D-201ENST00000222120 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.33□□□□□ -0.28
RAB3D-201ENST00000222120 GIPC3Q8TF64 312 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 ISL2Q96A47 359 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 AMBNQ9NP70 447 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 FARSBQ9NSD9 589 aaKnown RBP13.33□□□□□ -0.28
RAB3D-201ENST00000222120 SAP18O00422 153 aaKnown RBP13.33□□□□□ -0.28
RAB3D-201ENST00000222120 OCM2P0CE71 109 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 OCMP0CE72 109 aaPredicted RBP13.33□□□□□ -0.28
RAB3D-201ENST00000222120 SERPINB10P48595 397 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 SGSHP51688 502 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 MYBPC1Q00872 1141 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 CBX2Q14781 532 aaPredicted RBP13.33□□□□□ -0.28
RAB3D-201ENST00000222120 ZNF540Q8NDQ6 660 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 CYB5D2Q8WUJ1 264 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 MYLIPQ8WY64 445 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 DNAJC11Q9NVH1 559 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 SMOXQ9NWM0 555 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 PCNTO95613 3336 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 PGRP06401 933 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 HNF1BP35680 557 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 DSC3Q14574 896 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 RAET1GQ6H3X3 334 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 ERAP2Q6P179 960 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 RNF111Q6ZNA4 994 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 BHLHA9Q7RTU4 235 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 BBS7Q8IWZ6 715 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 TMEM199Q8N511 208 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 BEND7Q8N7W2 519 aaPredicted RBP13.33□□□□□ -0.28
RAB3D-201ENST00000222120 L3HYPDHQ96EM0 354 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 ATOH8Q96SQ7 321 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 SLCO3A1Q9UIG8 710 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 PCTPQ9UKL6 214 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 DHRS7Q9Y394 339 aa13.33□□□□□ -0.28
RAB3D-201ENST00000222120 C7orf72A4D263 438 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 TRBC1P01850 177 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 KLKB1P03952 638 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 IL7RP16871 459 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 ATF6P18850 670 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 CCNA2P20248 432 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 PTCHD3Q3KNS1 767 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 OR4F3Q6IEY1 312 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 RRM2BQ7LG56 351 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 THAP5Q7Z6K1 395 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 SGK2Q9HBY8 427 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 CCM2LQ9NUG4 571 aaPredicted RBP13.32□□□□□ -0.28
RAB3D-201ENST00000222120 TRPC4Q9UBN4 977 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 RAPGEFL1Q9UHV5 662 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 LOC100506127A0A0U1RQW1 187 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 IFRD1O00458 451 aaPredicted RBP13.32□□□□□ -0.28
RAB3D-201ENST00000222120 TOR1BO14657 336 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 FPGTO14772 594 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 GBAP04062 536 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 ELFN1P0C7U0 828 aa13.32□□□□□ -0.28
RAB3D-201ENST00000222120 CYP2A6P11509 494 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms