RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 NDNFQ8TB73 568 aa10.92□□□□□ -0.66
USP31-201ENST00000219689 NEK7Q8TDX7 302 aa10.92□□□□□ -0.66
USP31-201ENST00000219689 MMP27Q9H306 513 aa10.92□□□□□ -0.66
USP31-201ENST00000219689 IFNGP01579 166 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 SRCP12931 536 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 WDR49Q8IV35 697 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 LINGO1Q96FE5 620 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 STK32BQ9NY57 414 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 ZNF254O75437 659 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 SERPINB7O75635 380 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 JUNDP17535 347 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 CDH8P55286 799 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 CPTPQ5TA50 214 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 RNF31Q96EP0 1072 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 PURBQ96QR8 312 aaKnown RBP10.91□□□□□ -0.66
USP31-201ENST00000219689 SSU72Q9NP77 194 aaKnown RBP10.91□□□□□ -0.66
USP31-201ENST00000219689 JCADQ9P266 1359 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 EIF5AP63241 154 aaKnown RBP10.91□□□□□ -0.66
USP31-201ENST00000219689 MARC1Q5VT66 337 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 OR52E8Q6IFG1 317 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 SMARCD3Q6STE5 483 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 OR5T3Q8NGG3 340 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 TBX5Q99593 518 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 EIF5A2Q9GZV4 153 aaKnown RBP10.91□□□□□ -0.66
USP31-201ENST00000219689 ENAMQ9NRM1 1142 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 CDC14AQ9UNH5 594 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 FARSAQ9Y285 508 aaKnown RBP10.91□□□□□ -0.66
USP31-201ENST00000219689 SULT2A1Q06520 285 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 GALNT1Q10472 559 aaPredicted RBP10.91□□□□□ -0.66
USP31-201ENST00000219689 ELP2Q6IA86 826 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 ZYG11BQ9C0D3 744 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 XPNPEP1Q9NQW7 623 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 TIMM22Q9Y584 194 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 F8W036 122 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 CBX4O00257 560 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 RORAP35398 523 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 BLOC1S1P78537 153 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 GBE1Q04446 702 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 TKFCQ3LXA3 575 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 FAM183BPQ6ZVS7 135 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 ZNF598Q86UK7 904 aaKnown RBP10.91□□□□□ -0.66
USP31-201ENST00000219689 FAM86C2PA6NEL3 165 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 A6NL46 340 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 ATAD3CQ5T2N8 411 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 EIF5AL1Q6IS14 154 aaKnown RBP10.91□□□□□ -0.66
USP31-201ENST00000219689 ZNF627Q7L945 461 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 CRB1P82279 1406 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 MYO5AQ9Y4I1 1855 aaKnown RBP10.91□□□□□ -0.66
USP31-201ENST00000219689 MCIDASD6RGH6 385 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 HTRA2O43464 458 aaPredicted RBP10.91□□□□□ -0.66
USP31-201ENST00000219689 SAGP10523 405 aaPredicted RBP10.91□□□□□ -0.66
USP31-201ENST00000219689 PGAM2P15259 253 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 FAM71AQ8IYT1 594 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 PSD4Q8NDX1 1056 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 LRRC58Q96CX6 371 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 TBCBQ99426 244 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 EFCAB6Q5THR3 1501 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 BBOX1O75936 387 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 OTCP00480 354 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 CSTF2P33240 577 aaKnown RBP eCLIP10.91□□□□□ -0.664e-8■□□□□ 9.3
USP31-201ENST00000219689 MOGSQ13724 837 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 LRRC70Q7Z2Q7 622 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 PDZD9Q8IXQ8 264 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 IL4I1Q96RQ9 567 aa10.91□□□□□ -0.66
USP31-201ENST00000219689 TDRD3Q9H7E2 651 aaKnown RBP10.91□□□□□ -0.66
USP31-201ENST00000219689 A0A1B0GV50 99 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 EEF1E1O43324 174 aaKnown RBP10.9□□□□□ -0.66
USP31-201ENST00000219689 INSCQ1MX18 579 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 KLHL26Q53HC5 615 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 DCST1Q5T197 706 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 MARCH9Q86YJ5 346 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 MMAAQ8IVH4 418 aaKnown RBP10.9□□□□□ -0.66
USP31-201ENST00000219689 COQ10AQ96MF6 247 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 CBY1Q9Y3M2 126 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 RPS6KA4O75676 772 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 FMO1Q01740 532 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 EFEMP1Q12805 493 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 FGFBP1Q14512 234 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 ZNF460Q14592 562 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 ANKRD22Q5VYY1 191 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 TDRPQ86YL5 185 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 LIX1Q8N485 282 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 SOX17Q9H6I2 414 aaPredicted RBP10.9□□□□□ -0.66
USP31-201ENST00000219689 TEX51A0A1B0GUA7 166 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 TRBC1P01850 177 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 MMP8P22894 467 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 AZIN2Q96A70 460 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 KIAA1257Q9ULG3 409 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 ARHGEF15O94989 841 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 ALDH7A1P49419 539 aaKnown RBP10.9□□□□□ -0.66
USP31-201ENST00000219689 HSPA14Q0VDF9 509 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 TMEM199Q8N511 208 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 PACRGLQ8N7B6 248 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 MFSD2AQ8NA29 543 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 KLHL6Q8WZ60 621 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 SLC35C1Q96A29 364 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 SMURF2Q9HAU4 748 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 RIIAD1A6NNX1 92 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 USP17L7P0C7H9 530 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 HNRNPH3P31942 346 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms