RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 VCX3BQ9H321 246 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 SLC32A1Q9H598 525 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 DZANK1Q9NVP4 752 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 GID8Q9NWU2 228 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 C6orf203Q9P0P8 240 aaPredicted RBP29.08■■■□□ 2.25
PABPN1-201ENST00000216727 EPS15L1Q9UBC2 864 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 LRCH1Q9Y2L9 728 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 EDDM13A0A1B0GTR0 161 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 HIST1H2AGP0C0S8 130 aaPredicted RBP29.08■■■□□ 2.25
PABPN1-201ENST00000216727 HIST1H2ADP20671 130 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 HNMTP50135 292 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 KCNK10P57789 538 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 GRIN2CQ14957 1233 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 C9orf64Q5T6V5 341 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 VRK3Q8IV63 474 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 ASZ1Q8WWH4 475 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 HIST1H2AHQ96KK5 128 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 HIST1H2AJQ99878 128 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 H2AFJQ9BTM1 129 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 C1orf50Q9BV19 199 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 ABCD2Q9UBJ2 740 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 CCL27Q9Y4X3 112 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 TCN1P20061 433 aaPredicted RBP29.07■■■□□ 2.24
PABPN1-201ENST00000216727 ITGB7P26010 798 aa29.07■■■□□ 2.24
PABPN1-201ENST00000216727 FOXM1Q08050 763 aa29.07■■■□□ 2.24
PABPN1-201ENST00000216727 FNDC3BQ53EP0 1204 aaKnown RBP29.07■■■□□ 2.24
PABPN1-201ENST00000216727 LRRC70Q7Z2Q7 622 aa29.07■■■□□ 2.24
PABPN1-201ENST00000216727 FAM156AQ8NDB6 213 aa29.07■■■□□ 2.24
PABPN1-201ENST00000216727 ELMO1Q92556 727 aa29.07■■■□□ 2.24
PABPN1-201ENST00000216727 GLYATL1Q969I3 302 aa29.07■■■□□ 2.24
PABPN1-201ENST00000216727 TEX37Q96LM6 180 aa29.07■■■□□ 2.24
PABPN1-201ENST00000216727 THG1LQ9NWX6 298 aaKnown RBP29.07■■■□□ 2.24
PABPN1-201ENST00000216727 SLC7A2P52569 658 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 UFM1P61960 85 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 SHHQ15465 462 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 SMU1Q2TAY7 513 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 RASGRP3Q8IV61 690 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 OR8D1Q8WZ84 308 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 AP2M1Q96CW1 435 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 PPP3R2Q96LZ3 170 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 MUC22E2RYF6 1773 aaPredicted RBP29.06■■■□□ 2.24
PABPN1-201ENST00000216727 TRANK1O15050 2925 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 FXYD1O00168 92 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 WNT9AO14904 365 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 SLCO2B1O94956 709 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 AP1S2P56377 157 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 MRPS22P82650 360 aaKnown RBP29.06■■■□□ 2.24
PABPN1-201ENST00000216727 ACOX1Q15067 660 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 NR6A1Q15406 480 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 CYP2U1Q7Z449 544 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 PQLC1Q8N2U9 271 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 SKA2Q8WVK7 121 aaPredicted RBP29.06■■■□□ 2.24
PABPN1-201ENST00000216727 CDCA3Q99618 268 aaPredicted RBP29.06■■■□□ 2.24
PABPN1-201ENST00000216727 SLC29A3Q9BZD2 475 aa29.06■■■□□ 2.24
PABPN1-201ENST00000216727 FAM234BA2RU67 622 aa29.05■■■□□ 2.24
PABPN1-201ENST00000216727 C9JVG2 144 aa29.05■■■□□ 2.24
PABPN1-201ENST00000216727 EEDO75530 441 aaKnown RBP29.05■■■□□ 2.24
PABPN1-201ENST00000216727 CYP2A7P20853 494 aa29.05■■■□□ 2.24
PABPN1-201ENST00000216727 ELAVL3Q14576 367 aaKnown RBP29.05■■■□□ 2.24
PABPN1-201ENST00000216727 RARS2Q5T160 578 aaKnown RBP29.05■■■□□ 2.24
PABPN1-201ENST00000216727 IZUMO2Q6UXV1 221 aa29.05■■■□□ 2.24
PABPN1-201ENST00000216727 TRIM46Q7Z4K8 759 aa29.05■■■□□ 2.24
PABPN1-201ENST00000216727 PROKR1Q8TCW9 393 aa29.05■■■□□ 2.24
PABPN1-201ENST00000216727 COQ10AQ96MF6 247 aa29.05■■■□□ 2.24
PABPN1-201ENST00000216727 SLC39A3Q9BRY0 314 aa29.05■■■□□ 2.24
PABPN1-201ENST00000216727 HPS4Q9NQG7 708 aa29.05■■■□□ 2.24
PABPN1-201ENST00000216727 DYTNA2CJ06 578 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 LOC730098B7Z3J9 87 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 SPINT1O43278 529 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 FCARP24071 287 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 SLC6A12P48065 614 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 POLR2JP52435 117 aaKnown RBP29.04■■■□□ 2.24
PABPN1-201ENST00000216727 CREB5Q02930 508 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 GET4Q7L5D6 327 aaPredicted RBP29.04■■■□□ 2.24
PABPN1-201ENST00000216727 TMEM126BQ8IUX1 230 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 LRRC58Q96CX6 371 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 ECSITQ9BQ95 431 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 ITM2BQ9Y287 266 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 RNF11Q9Y3C5 154 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 PABPN1LA6NDY0 278 aaKnown RBP29.04■■■□□ 2.24
PABPN1-201ENST00000216727 SLC28A1O00337 649 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 RGS14O43566 566 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 ULK1O75385 1050 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 PBX2P40425 430 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 AP5B1Q2VPB7 878 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 SPATS1Q496A3 300 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 GPR149Q86SP6 731 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 PIP4K2CQ8TBX8 421 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 MCOLN3Q8TDD5 553 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 DTD2Q96FN9 168 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 TMEM245Q9H330 911 aa29.04■■■□□ 2.24
PABPN1-201ENST00000216727 CLDN9O95484 217 aa29.03■■■□□ 2.24
PABPN1-201ENST00000216727 HLA-EP13747 358 aa29.03■■■□□ 2.24
PABPN1-201ENST00000216727 EPORP19235 508 aa29.03■■■□□ 2.24
PABPN1-201ENST00000216727 ELP6Q0PNE2 266 aa29.03■■■□□ 2.24
PABPN1-201ENST00000216727 ZXDCQ2QGD7 858 aaPredicted RBP29.03■■■□□ 2.24
PABPN1-201ENST00000216727 USP7Q93009 1102 aa29.03■■■□□ 2.24
PABPN1-201ENST00000216727 LRCH3Q96II8 777 aa29.03■■■□□ 2.24
PABPN1-201ENST00000216727 HBEGFQ99075 208 aa29.03■■■□□ 2.24
PABPN1-201ENST00000216727 PCDHAC1Q9H158 963 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms