RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 PPM1HQ9ULR3 514 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 SLC9A3R1O14745 358 aaPredicted RBP13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 NDST3O95803 873 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 HLA-DQB2P05538 268 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 TSHRP16473 764 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 MNDAP41218 407 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 GLUD2P49448 558 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 CSTF1Q05048 431 aaKnown RBP13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 ALG11Q2TAA5 492 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 SLC10A6Q3KNW5 377 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 PARP15Q460N3 678 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 LIN52Q52LA3 116 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 BANPQ8N9N5 519 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 SNX27Q96L92 541 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 IL4I1Q96RQ9 567 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 RHCGQ9UBD6 479 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 KCTD3Q9Y597 815 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 CCDC162PA2VCL2 907 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 NME6O75414 186 aaPredicted RBP13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 PRKACGP22612 351 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 ECT2LQ008S8 904 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 SYT16Q17RD7 645 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 MSS51Q4VC12 460 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 VARS2Q5ST30 1063 aaKnown RBP13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 GDF6Q6KF10 455 aaPredicted RBP13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 MED27Q6P2C8 311 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 RIPOR3Q96MK2 946 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 TLL2Q9Y6L7 1015 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 IGLV3-22A0A075B6J6 115 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 MAGEB17A8MXT2 336 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 CLIC3O95833 236 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 MTA1Q13330 715 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 OR10H5Q8NGA6 315 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 CXorf21Q9HAI6 301 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 TMEM131LA2VDJ0 1609 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 ROBO3Q96MS0 1386 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 BBIP1A8MTZ0 92 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 FADS2P1A8MWK0 482 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 CLDN11O75508 207 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 HOXB8P17481 243 aaPredicted RBP13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 RPL10P27635 214 aaKnown RBP13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 SMIM11AP58511 58 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 CRTC2Q53ET0 693 aaPredicted RBP13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 SLC2A7Q6PXP3 512 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 TTYH3Q9C0H2 523 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 ARHGAP23Q9P227 1491 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 SMIM35A0A1B0GVV1 85 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 QSOX1O00391 747 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 XKRYO14609 159 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 KHNYNO15037 678 aaKnown RBP13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 MATN3O15232 486 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 VIPP01282 170 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 IGFALSP35858 605 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 HID1Q8IV36 788 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 OR6K6Q8NGW6 343 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 TMEM74Q96NL1 305 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 NODALQ96S42 347 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 TMED9Q9BVK6 235 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 UPK3BL1B0FP48 263 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 UPK3BL2E5RIL1 263 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 GCATO75600 419 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 CD247P20963 164 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 SLC13A2Q13183 592 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 ARSIQ5FYB1 569 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 FUT10Q6P4F1 479 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 ERICH5Q6P6B1 374 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 VSTM1Q6UX27 236 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 OR9I1Q8NGQ6 314 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 SLC25A36Q96CQ1 311 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 C7orf26Q96N11 449 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 FTHL17Q9BXU8 183 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 WDR12Q9GZL7 423 aaKnown RBP13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 RNF39Q9H2S5 420 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 FBXW11Q9UKB1 542 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 MAPRE3Q9UPY8 281 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 MID1O15344 667 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 RPLP2P05387 115 aaKnown RBP13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 BDKRB1P46663 353 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 PAQR3Q6TCH7 311 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 C10orf82Q8WW14 230 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 CCDC115Q96NT0 180 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 TEFMQ96QE5 360 aaKnown RBP13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 MED31Q9Y3C7 131 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 A0A1W2PRU2 124 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 TCAF2A6NFQ2 919 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 SLC38A8A6NNN8 435 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 GADD45GO95257 159 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 TGDSO95455 350 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 PGRP06401 933 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 C8orf89P0DMQ9 161 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 FKBP1AP62942 108 aaKnown RBP13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 NFKB2Q00653 900 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 SP2Q02086 613 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 FOXM1Q08050 763 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 P2RY8Q86VZ1 359 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 ARMC10Q8N2F6 343 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 RAB26Q9ULW5 256 aa13.4□□□□□ -0.26
TGFBR3-201ENST00000212355 C5orf60A6NFR6 353 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 A8MU76 341 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 MAGEB3O15480 346 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms