RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Ccdc187Q8C5V8 958 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Mill2Q8HWE5 355 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Tmco1Q921L3 188 aaKnown RBP15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Cryl1Q99KP3 319 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Nde1Q9CZA6 344 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Clic3Q9D7P7 237 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Glod5Q9D8I3 148 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Il17dA0A0B4J1G4 205 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Galntl6E5D8G1 601 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Rnf169E9Q7F2 694 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Gm20671F6TVX7 576 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 AF366264G3X9P9 502 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Mllt10O54826 1068 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 MaxP28574 160 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Rpl5P47962 297 aaKnown RBP15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Inpp1P49442 396 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Pitpnm3Q3UHE1 974 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Esrp1Q3US41 680 aaKnown RBP15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Naa11Q3UX61 218 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Il10raQ61727 575 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Dusp26Q9D700 211 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Nectin1Q9JKF6 515 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 SufuQ9Z0P7 484 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Ltb4rO88855 351 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Fv4P11370 679 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Hspa4lP48722 838 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Q14AM7 275 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Ranbp10Q6VN19 620 aaKnown RBP15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 AgmoQ8BS35 447 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Mettl22Q8R1C6 393 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Cd207Q8VBX4 331 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Pcdhga9Q91XX9 932 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Det1Q9D0A0 550 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Tor1bQ9ER41 336 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Sema4fQ9Z123 777 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Igkv10-95A0A0G2JFY3 115 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Gm43518A0A0G2JGB6 165 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Rab17P35292 214 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Fgf13P70377 245 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 CamkvQ3UHL1 512 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Hsd3b5Q61694 373 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 C8bQ8BH35 589 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Vmn1r185Q8R299 319 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Sgsm3Q8VCZ6 750 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Macrod1Q922B1 323 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 AasdhpptQ9CQF6 309 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Wdr73Q9CWR1 371 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 DlstQ9D2G2 454 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Stx12Q9ER00 274 aa15.59■□□□□ 0.09
Trim39-203ENSMUST00000113706 Fam131cA2ADB2 273 aa15.58■□□□□ 0.09
Trim39-203ENSMUST00000113706 RfngO09009 332 aa15.58■□□□□ 0.09
Trim39-203ENSMUST00000113706 Tmem102Q3UPR7 509 aa15.58■□□□□ 0.09
Trim39-203ENSMUST00000113706 Pacs2Q3V3Q7 862 aa15.58■□□□□ 0.09
Trim39-203ENSMUST00000113706 Lrch3Q8BVU0 778 aa15.58■□□□□ 0.09
Trim39-203ENSMUST00000113706 Tnip2Q99JG7 430 aa15.58■□□□□ 0.09
Trim39-203ENSMUST00000113706 Paip2Q9D6V8 124 aa15.58■□□□□ 0.09
Trim39-203ENSMUST00000113706 Tp73Q9JJP2 631 aa15.58■□□□□ 0.09
Trim39-203ENSMUST00000113706 ProdhQ9WU79 599 aa15.58■□□□□ 0.09
Trim39-203ENSMUST00000113706 Tbk1Q9WUN2 729 aa15.58■□□□□ 0.09
Trim39-203ENSMUST00000113706 Olfr1200A2ATJ4 336 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Gm28043E0CXC2 719 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Csf3rP40223 837 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Lrrc3P59034 257 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Naa20P61600 178 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Clec4fP70194 548 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Aup1P70295 410 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Mmp11Q02853 492 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 RalgdsQ03385 852 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Tgm3Q08189 693 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Col28a1Q2UY11 1141 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 PomkQ3TUA9 349 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Q3TYS2 187 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 EndouQ3V188 412 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Zdhhc20Q5Y5T1 380 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Nt5eQ61503 576 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Pcbp2Q61990 362 aaKnown RBP15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Osbpl6Q8BXR9 959 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Q8R1Y2 203 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Golga7Q91W53 137 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Nudt14Q9D142 222 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Bpifa3Q9D9J8 232 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 SrpraQ9DBG7 636 aaKnown RBP15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Fam13cQ9DBR2 601 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Olfr704Q9EPF6 315 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Nrip2Q9JHR9 270 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 IL36RNQ9QYY1 156 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 St6galnac1Q9QZ39 526 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 CpqQ9WVJ3 470 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Mrgpra2aA0A0R4J1Z0 331 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Olfr839-ps1A0A1D5RMH6 312 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Mllt3A2AM29 569 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Gm3173A6NAS3 172 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 4930455H04RikD3Z622 58 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Gm3020E9Q3J7 150 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Gm2897K7N6T7 172 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 LatO54957 242 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 P01665 111 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 P01666 111 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Ssr4Q62186 172 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 SvoplQ6PDF3 494 aa15.58■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms