RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Impg1Q8R1W8 798 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tmem168Q91VX9 697 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Lnx2Q91XL2 687 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 F11Q91Y47 624 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Rxfp2Q91ZZ5 737 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Slc41a3Q921R8 488 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ppil3Q9D6L8 161 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 MrrfQ9D6S7 262 aaKnown RBP9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Izumo2Q9DA16 220 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tmprss6Q9DBI0 811 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Osbpl3Q9DBS9 855 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Pole3Q9JKP7 145 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Hs6st1Q9QYK5 411 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 ChmlQ9QZD5 621 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Trpv2Q9WTR1 756 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm45861A0A1B0GRY3 1923 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ccdc194A0A140LIT1 234 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Vmn1r2A2AMT6 306 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Vmn2r50E9PW61 861 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Apold1E9Q0X2 246 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Olfr746E9Q840 314 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm5861F6VCN9 180 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 FosP01101 380 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 LckP06240 509 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gdf6P43028 454 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Csrp3P50462 194 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Acod1P54987 488 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Morf4l1P60762 362 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Aup1P70295 410 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Nos3P70313 1202 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Dlx4P70436 240 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Meis2P97367 477 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Kcnq1P97414 668 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 ArvcfP98203 962 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 MocosQ14CH1 862 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 RogdiQ3TDK6 287 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 MyrflQ3UN70 904 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gpr149Q3UVY1 732 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Zc3h12cQ5DTV4 884 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tmem270Q6UJB9 264 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Rpl35Q6ZWV7 123 aaKnown RBP9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Fbxl14Q8BID8 400 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Fzd10Q8BKG4 582 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Olfm2Q8BM13 448 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Armc6Q8BNU0 468 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Slc39a11Q8BWY7 342 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 ReltQ8BX43 436 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tmem132cQ8CEF9 1099 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cyp51a1Q8K0C4 503 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Dclre1cQ8K4J0 705 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Mcfd2Q8K5B2 145 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 NclnQ8VCM8 563 aaKnown RBP9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ak6Q8VCP8 172 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Raf1Q99N57 648 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Q9CQC3 228 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Rhox2aQ9D4Y3 191 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Sphk2Q9JIA7 617 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Rgs21V9GXQ3 152 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 EvplQ9D952 2035 aa9.59□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Fndc3c1Q6DFV6 1356 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 DohhA0A1Y7VJ29 135 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 L3mbtl1A2A5N8 826 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Fam166bA2AIP0 273 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm11239E9Q5Z9 360 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ceacam3E9Q6J4 706 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm11237F2Z3W5 360 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm11238F2Z478 360 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm11236J3QMS7 360 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Il1bP10749 269 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ier2P17950 221 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Eno3P21550 434 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Adra2bP30545 450 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 AbatP61922 500 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 MybphP70402 483 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 UrodP70697 367 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 PomkQ3TUA9 349 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm428Q3UTE2 360 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Sema4cQ64151 834 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ppp1r26Q6A025 1163 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 KdsrQ6GV12 332 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm21627Q810R0 219 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Pgs1Q8BHF7 553 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ifi44Q8BV66 422 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Calhm4Q8CE93 315 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Slc22a12Q8CFZ5 553 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gpr153Q8K0Z9 631 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Rnf219Q8K2Y0 722 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Kctd11Q8K485 232 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 NotumQ8R116 503 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr820Q8VFU5 312 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 B4galt3Q91YY2 395 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gstt3Q99L20 241 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mrto4Q9D0I8 239 aaKnown RBP9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cdca7Q9D0M2 382 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Spata9Q9D9R3 252 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Dkc1Q9ESX5 509 aaKnown RBP9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mettl1Q9Z120 268 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Dicer1Q8R418 1916 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 FcmrA1KXC4 422 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm4846B2RWH8 538 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms