RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 MfrpQ8K480 584 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Art4Q9CRA0 300 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 CutalQ9D1U5 156 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Clec2gQ9D676 269 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 PgcQ9D7R7 392 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Tmprss6Q9DBI0 811 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Fads3Q9JJE7 449 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Foxe3Q9QY14 288 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Wdr54Q9R0D8 334 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Gm4869A0A1B0GSG7 984 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 A6H6Q4 206 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 TriqkB2B9E1 86 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 MaffO54791 156 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Anxa6P14824 673 aaKnown RBP16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Rps3P62908 243 aaKnown RBP16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Rps17P63276 135 aaKnown RBP16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 PhexP70669 749 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Fpr-rs6Q3SXG2 339 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 G2e3Q5RJY2 716 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Mapk10Q61831 464 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 RhocQ62159 193 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Bend6Q6PFX2 281 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 RimklaQ6PFX8 380 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Ubtd2Q6PGH0 234 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Mfn1Q811U4 741 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Hspa13Q8BM72 471 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Vmn1r18Q8R2C8 299 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 WwoxQ91WL8 414 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Pcdhb8Q91XZ2 779 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Syt12Q920N7 421 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 TrabdQ99JY4 376 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 CatsperzQ9CQP8 194 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Ska2Q9CR46 120 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Gbe1Q9D6Y9 702 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Zbp1Q9QY24 411 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 DnpepQ9Z2W0 473 aa16.16■□□□□ 0.18
Shh-201ENSMUST00000002708 Olfr1480A0A140LIR8 359 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Trim12cD3Z3L3 497 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Speer4cG3UXD1 256 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Gm11236J3QMS7 360 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Gm10354K7N6A0 256 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Olfr237-ps1K9J725 310 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Grem1O70326 184 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 NagluO88325 739 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Coro1aO89053 461 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Q3KNL4 93 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Abraxas2Q3TCJ1 415 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Adora2bQ60614 332 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 C2cd4bQ80XU5 340 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Pgs1Q8BHF7 553 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 4921511C20RikQ8BVT7 469 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Arl10Q9QXJ4 243 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Krt6bQ9Z331 562 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Gm31371A0A1D5RM70 265 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Slc28a1E9PXX9 648 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Gm10715J3QP74 227 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 ApoeP08226 311 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Itgb1P09055 798 aaKnown RBP16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 C2P21180 760 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 MitfQ08874 526 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 LchnQ3UHG7 455 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Glb1l2Q3UPY5 636 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Creb3Q61817 404 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Ckmt2Q6P8J7 419 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 AW551984Q8BGF0 804 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 GmppbQ8BTZ7 360 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Ifi44Q8BV66 422 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Fam221bQ8C627 487 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Zcchc9Q8R1J3 271 aaKnown RBP16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Nae1Q8VBW6 534 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Atp6v1c2Q99L60 427 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Tchhl1Q9D3P1 638 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Fundc2Q9D6K8 151 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Rdh11Q9QYF1 316 aa16.15■□□□□ 0.18
Shh-201ENSMUST00000002708 Fkbp7O54998 218 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Hoxa9P09631 271 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 ThrbP37242 461 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Npy2rP97295 381 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 PamP97467 979 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 IdsQ08890 552 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Olfr213Q7TS32 327 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Zbtb24Q80X44 710 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Ppp1r3eQ8BRJ4 279 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 BicralQ8CHH5 1074 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Armcx6Q8K3A6 301 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Pcdhga4Q91XY4 930 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 MpstQ99J99 297 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Znf639Q99KZ6 485 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 NtpcrQ9CQA9 190 aaKnown RBP16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Ifitm3Q9CQW9 137 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Spatc1lQ9D9W0 342 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 VapaQ9WV55 249 aaKnown RBP16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Padi3Q9Z184 664 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Mrpl40Q9Z2Q5 206 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Gbp11A9YVJ5 442 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Nhsl2B1AXH1 854 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Gm4871D3Z0W7 314 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Vmn1r238E9Q373 306 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Pgbd1E9Q492 415 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Vmn2r10K7N621 847 aa16.14■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 62.2 ms