RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 RIMKLAQ8IXN7 391 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 PACRGLQ8N7B6 248 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 ARL14EPQ8N8R7 260 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-223ENST00000641597 THUMPD3Q9BV44 507 aaKnown RBP16.53■□□□□ 0.24
PHGDH-223ENST00000641597 CLPBQ9H078 707 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 HEBP1Q9NRV9 189 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 EXD2Q9NVH0 621 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 SLC25A37Q9NYZ2 338 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 TRPM5Q9NZQ8 1165 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 A0A087WXM4 84 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 A0A1W2PPW3 197 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 UPK3BL1B0FP48 263 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 UPK3BL2E5RIL1 263 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 HTR1EP28566 365 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 RAB39AQ14964 217 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 KIAA0040Q15053 153 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 ANKDD1AQ495B1 522 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 KCTD21Q4G0X4 260 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 LRRC23Q53EV4 343 aaPredicted RBP16.52■□□□□ 0.24
PHGDH-223ENST00000641597 FGD3Q5JSP0 725 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 IRAK1BP1Q5VVH5 260 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 SLC8B1Q6J4K2 584 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 KIAA1841Q6NSI8 718 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 FAM117BQ6P1L5 589 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.52■□□□□ 0.24
PHGDH-223ENST00000641597 ANKRD46Q86W74 232 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 TBC1D21Q8IYX1 336 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 CD99L2Q8TCZ2 262 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 BPIFB1Q8TDL5 484 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 ADAMTS19Q8TE59 1207 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 MYO19Q96H55 970 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 CXorf21Q9HAI6 301 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 NUDT4Q9NZJ9 180 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 AFF4Q9UHB7 1163 aaKnown RBP16.52■□□□□ 0.24
PHGDH-223ENST00000641597 PHF24Q9UPV7 400 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 PCDHGA11Q9Y5H2 935 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 ANAPC1Q9H1A4 1944 aa16.52■□□□□ 0.24
PHGDH-223ENST00000641597 H7C4K7 107 aa16.52■□□□□ 0.23
PHGDH-223ENST00000641597 ARVCFO00192 962 aa16.52■□□□□ 0.23
PHGDH-223ENST00000641597 IL7RP16871 459 aa16.52■□□□□ 0.23
PHGDH-223ENST00000641597 PRKACGP22612 351 aa16.52■□□□□ 0.23
PHGDH-223ENST00000641597 NEK2P51955 445 aa16.52■□□□□ 0.23
PHGDH-223ENST00000641597 TUBA4AP68366 448 aa16.52■□□□□ 0.23
PHGDH-223ENST00000641597 ZXDCQ2QGD7 858 aaPredicted RBP16.52■□□□□ 0.23
PHGDH-223ENST00000641597 KCTD8Q6ZWB6 473 aa16.52■□□□□ 0.23
PHGDH-223ENST00000641597 NPAS4Q8IUM7 802 aa16.52■□□□□ 0.23
PHGDH-223ENST00000641597 ERI1Q8IV48 349 aaKnown RBP16.52■□□□□ 0.23
PHGDH-223ENST00000641597 LRRC43Q8N309 656 aa16.52■□□□□ 0.23
PHGDH-223ENST00000641597 RNF175Q8N4F7 328 aa16.52■□□□□ 0.23
PHGDH-223ENST00000641597 PAPD5Q8NDF8 572 aaKnown RBP16.52■□□□□ 0.23
PHGDH-223ENST00000641597 ITFG1Q8TB96 612 aa16.52■□□□□ 0.23
PHGDH-223ENST00000641597 GALNT8Q9NY28 637 aa16.52■□□□□ 0.23
PHGDH-223ENST00000641597 KLHL33A6NCF5 533 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 LOC730098B7Z3J9 87 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 AREL1O15033 823 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 HNF1BP35680 557 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 CDH18Q13634 790 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 CHRNA6Q15825 494 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 TPGS1Q6ZTW0 290 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 GPR180Q86V85 440 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 CRIPAKQ8N1N5 446 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 LIX1Q8N485 282 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 TSPEARQ8WU66 669 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 ITCHQ96J02 903 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 LATS2Q9NRM7 1088 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 RHBDL2Q9NX52 303 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 VPS9D1Q9Y2B5 631 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 OR51B4Q9Y5P0 310 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 U3KQV3 271 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 A0A0J9YVX5 310 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 H7C0S8 307 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 TFPTP0C1Z6 253 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 BPIP17213 487 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 MTHFRP42898 656 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 PHC1P78364 1004 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 ADARB1P78563 741 aaKnown RBP16.51■□□□□ 0.23
PHGDH-223ENST00000641597 GRIK2Q13002 908 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 NFATC2Q13469 925 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 PCBP2Q15366 365 aaKnown RBP eCLIP16.51■□□□□ 0.23
PHGDH-223ENST00000641597 CPSF6Q16630 551 aaKnown RBP eCLIP16.51■□□□□ 0.23
PHGDH-223ENST00000641597 ABRAXAS1Q6UWZ7 409 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 PATL1Q86TB9 770 aaKnown RBP16.51■□□□□ 0.23
PHGDH-223ENST00000641597 MYLIPQ8WY64 445 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 PLD4Q96BZ4 506 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 CWH43Q9H720 699 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 ZFYVE1Q9HBF4 777 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 WWOXQ9NZC7 414 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 IFT80Q9P2H3 777 aaPredicted RBP16.51■□□□□ 0.23
PHGDH-223ENST00000641597 MTRRQ9UBK8 725 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.51■□□□□ 0.23
PHGDH-223ENST00000641597 PTBP2Q9UKA9 531 aaKnown RBP16.51■□□□□ 0.23
PHGDH-223ENST00000641597 CHD7Q9P2D1 2997 aa16.51■□□□□ 0.23
PHGDH-223ENST00000641597 PGLSO95336 258 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 EEF1B2P24534 225 aaKnown RBP16.5■□□□□ 0.23
PHGDH-223ENST00000641597 PIGAP37287 484 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 ALDH7A1P49419 539 aaKnown RBP16.5■□□□□ 0.23
PHGDH-223ENST00000641597 STK19P49842 368 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-223ENST00000641597 ARSFP54793 590 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 SP3Q02447 781 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 LAPTM4AQ15012 233 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms