RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 CCDC86Q9H6F5 360 aaKnown RBP26.05■■□□□ 1.76
VEGFA-231ENST00000640499 POLR1BQ9H9Y6 1135 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 C20orf96Q9NUD7 363 aaPredicted RBP26.05■■□□□ 1.76
VEGFA-231ENST00000640499 WHRNQ9P202 907 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 CRYL1Q9Y2S2 319 aa26.05■■□□□ 1.76
VEGFA-231ENST00000640499 CCDC187A0A096LP49 1063 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 E7ESA3 106 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 DUX1O43812 170 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 BRINP1O60477 761 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 UBXN7O94888 489 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 HGFP14210 728 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 AOAHP28039 575 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 FMO4P31512 558 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 CD151P48509 253 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 EIF3BP55884 814 aaKnown RBP26.04■■□□□ 1.76
VEGFA-231ENST00000640499 GABREP78334 506 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 FASTKD3Q14CZ7 662 aaKnown RBP26.04■■□□□ 1.76
VEGFA-231ENST00000640499 HIF1AQ16665 826 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 PHF19Q5T6S3 580 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 ZNF470Q6ECI4 717 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 UNC5AQ6ZN44 842 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 LRRC6Q86X45 466 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 PDIK1LQ8N165 341 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 RSC1A1Q92681 617 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 AHCYL2Q96HN2 611 aaKnown RBP26.04■■□□□ 1.76
VEGFA-231ENST00000640499 GALPQ9UBC7 116 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 SLC24A2Q9UI40 661 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 AK5Q9Y6K8 562 aa26.04■■□□□ 1.76
VEGFA-231ENST00000640499 UBA6A0AVT1 1052 aaPredicted RBP26.03■■□□□ 1.76
VEGFA-231ENST00000640499 TMX2-CTNND1H3BSU7 103 aa26.03■■□□□ 1.76
VEGFA-231ENST00000640499 ERVK-10P10266 1014 aa26.03■■□□□ 1.76
VEGFA-231ENST00000640499 CSE1LP55060 971 aaKnown RBP26.03■■□□□ 1.76
VEGFA-231ENST00000640499 ADARP55265 1226 aaKnown RBP26.03■■□□□ 1.76
VEGFA-231ENST00000640499 GFERP55789 205 aa26.03■■□□□ 1.76
VEGFA-231ENST00000640499 ARL4CP56559 192 aa26.03■■□□□ 1.76
VEGFA-231ENST00000640499 BOP1Q14137 746 aaKnown RBP26.03■■□□□ 1.76
VEGFA-231ENST00000640499 HSP90AA5PQ58FG0 334 aa26.03■■□□□ 1.76
VEGFA-231ENST00000640499 PTRHD1Q6GMV3 140 aaKnown RBP26.03■■□□□ 1.76
VEGFA-231ENST00000640499 ZNF549Q6P9A3 640 aa26.03■■□□□ 1.76
VEGFA-231ENST00000640499 RAB11FIP2Q7L804 512 aa26.03■■□□□ 1.76
VEGFA-231ENST00000640499 PDZD3Q86UT5 571 aa26.03■■□□□ 1.76
VEGFA-231ENST00000640499 WDR36Q8NI36 951 aaKnown RBP26.03■■□□□ 1.76
VEGFA-231ENST00000640499 LRRC1Q9BTT6 524 aa26.03■■□□□ 1.76
VEGFA-231ENST00000640499 EPB41L1Q9H4G0 881 aa26.03■■□□□ 1.76
VEGFA-231ENST00000640499 KIR3DX1Q9H7L2 352 aa26.03■■□□□ 1.76
VEGFA-231ENST00000640499 ASCL3Q9NQ33 180 aa26.03■■□□□ 1.76
VEGFA-231ENST00000640499 GNPTGQ9UJJ9 305 aa26.03■■□□□ 1.76
VEGFA-231ENST00000640499 CHMP2BQ9UQN3 213 aa26.03■■□□□ 1.76
VEGFA-231ENST00000640499 PCDHGA8Q9Y5G5 932 aa26.03■■□□□ 1.76
VEGFA-231ENST00000640499 APC2O95996 2303 aa26.02■■□□□ 1.76
VEGFA-231ENST00000640499 KIF2AO00139 706 aaPredicted RBP26.02■■□□□ 1.76
VEGFA-231ENST00000640499 DXOO77932 396 aaKnown RBP26.02■■□□□ 1.76
VEGFA-231ENST00000640499 SLC1A2P43004 574 aa26.02■■□□□ 1.76
VEGFA-231ENST00000640499 MPP1Q00013 466 aa26.02■■□□□ 1.76
VEGFA-231ENST00000640499 THOC5Q13769 683 aaKnown RBP26.02■■□□□ 1.76
VEGFA-231ENST00000640499 SPANXN3Q5MJ09 141 aa26.02■■□□□ 1.76
VEGFA-231ENST00000640499 RNF187Q5TA31 235 aaPredicted RBP26.02■■□□□ 1.76
VEGFA-231ENST00000640499 STEAP4Q687X5 459 aa26.02■■□□□ 1.76
VEGFA-231ENST00000640499 ANKMY2Q8IV38 441 aa26.02■■□□□ 1.76
VEGFA-231ENST00000640499 ZFPM2Q8WW38 1151 aa26.02■■□□□ 1.76
VEGFA-231ENST00000640499 ZCCHC14Q8WYQ9 949 aaKnown RBP26.02■■□□□ 1.76
VEGFA-231ENST00000640499 TFGQ92734 400 aaPredicted RBP26.02■■□□□ 1.76
VEGFA-231ENST00000640499 SLC46A1Q96NT5 459 aa26.02■■□□□ 1.76
VEGFA-231ENST00000640499 DPYSL5Q9BPU6 564 aa26.02■■□□□ 1.76
VEGFA-231ENST00000640499 NAT9Q9BTE0 207 aa26.02■■□□□ 1.76
VEGFA-231ENST00000640499 FBXO6Q9NRD1 293 aaPredicted RBP26.02■■□□□ 1.76
VEGFA-231ENST00000640499 IARS2Q9NSE4 1012 aaKnown RBP26.02■■□□□ 1.76
VEGFA-231ENST00000640499 INTS10Q9NVR2 710 aaKnown RBP26.02■■□□□ 1.76
VEGFA-231ENST00000640499 MED16Q9Y2X0 877 aa26.02■■□□□ 1.76
VEGFA-231ENST00000640499 TMEM8BA6NDV4 472 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 NIPSNAP2O75323 286 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 SLCO2B1O94956 709 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 TTC4O95801 387 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 C9P02748 559 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 TPBGLP0DKB5 382 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 GABRB3P28472 473 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 LEPRP48357 1165 aaKnown RBP26.01■■□□□ 1.75
VEGFA-231ENST00000640499 PPP1CAP62136 330 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 SLC7A5Q01650 507 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 MN1Q10571 1320 aaPredicted RBP26.01■■□□□ 1.75
VEGFA-231ENST00000640499 TRMT10BQ6PF06 316 aaKnown RBP26.01■■□□□ 1.75
VEGFA-231ENST00000640499 ZDHHC24Q6UX98 284 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 ARHGAP22Q7Z5H3 698 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 KCNMB4Q86W47 210 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 SLC22A15Q8IZD6 547 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 NOA1Q8NC60 698 aaKnown RBP26.01■■□□□ 1.75
VEGFA-231ENST00000640499 BBOF1Q8ND07 529 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 ART4Q93070 314 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 LRRC39Q96DD0 335 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 FERD3LQ96RJ6 166 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 STRADBQ9C0K7 418 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 ZC3H7BQ9UGR2 993 aaKnown RBP26.01■■□□□ 1.75
VEGFA-231ENST00000640499 FBXO5Q9UKT4 447 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 LOXL2Q9Y4K0 774 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 USP24Q9UPU5 2620 aa26.01■■□□□ 1.75
VEGFA-231ENST00000640499 CELSR3Q9NYQ7 3312 aa26■■□□□ 1.75
VEGFA-231ENST00000640499 TLX3O43711 291 aaPredicted RBP26■■□□□ 1.75
VEGFA-231ENST00000640499 ESR1P03372 595 aa26■■□□□ 1.75
VEGFA-231ENST00000640499 AMD1P17707 334 aa26■■□□□ 1.75
VEGFA-231ENST00000640499 ETV5P41161 510 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms