RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 CALCOCO2Q13137 446 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 NFATC2Q13469 925 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 ELOAQ14241 798 aaKnown RBP13.49□□□□□ -0.25
HLA-C-210ENST00000640219 UGT8Q16880 541 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 ZXDCQ2QGD7 858 aaPredicted RBP13.49□□□□□ -0.25
HLA-C-210ENST00000640219 LRRC66Q68CR7 880 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 ALG1LQ6GMV1 187 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 CCDC137Q6PK04 289 aaKnown RBP13.49□□□□□ -0.25
HLA-C-210ENST00000640219 CEP128Q6ZU80 1094 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 Q6ZVL8 140 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 SLC13A5Q86YT5 568 aaPredicted RBP13.49□□□□□ -0.25
HLA-C-210ENST00000640219 SFRP1Q8N474 314 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 GRK7Q8WTQ7 553 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 CT55Q8WUE5 264 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 PNPLA2Q96AD5 504 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 SNRNP40Q96DI7 357 aaKnown RBP13.49□□□□□ -0.25
HLA-C-210ENST00000640219 NUS1Q96E22 293 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 COQ10AQ96MF6 247 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 AGAP2Q99490 1192 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 TRIM51Q9BSJ1 452 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 RUBCNLQ9H714 662 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 LNPEPQ9UIQ6 1025 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 SNX24Q9Y343 169 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 NFS1Q9Y697 457 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 FAM169AQ9Y6X4 670 aa13.49□□□□□ -0.25
HLA-C-210ENST00000640219 ZNF487B1APH4 448 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 C21orf140B9A014 251 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 CLDN7O95471 211 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 ANKRD34CP0C6C1 535 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 CD68P34810 354 aaPredicted RBP13.48□□□□□ -0.25
HLA-C-210ENST00000640219 PTGIRP43119 386 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 PLTPP55058 493 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 CAV1Q03135 178 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 WASHC5Q12768 1159 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 PDK1Q15118 436 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 PRKD1Q15139 912 aaPredicted RBP13.48□□□□□ -0.25
HLA-C-210ENST00000640219 PPP1R7Q15435 360 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 UAP1Q16222 522 aaPredicted RBP13.48□□□□□ -0.25
HLA-C-210ENST00000640219 CYP1B1Q16678 543 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 KCTD19Q17RG1 926 aaPredicted RBP13.48□□□□□ -0.25
HLA-C-210ENST00000640219 TFDP3Q5H9I0 405 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 TTC19Q6DKK2 380 aaPredicted RBP13.48□□□□□ -0.25
HLA-C-210ENST00000640219 DOK6Q6PKX4 331 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 TRIM74Q86UV6 250 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 PLXDC1Q8IUK5 500 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 LRRC49Q8IUZ0 686 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 OTUD6BQ8N6M0 293 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 BBOF1Q8ND07 529 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 SCAMP4Q969E2 229 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 SH3KBP1Q96B97 665 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 ELMO2Q96JJ3 720 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 OR2M4Q96R27 311 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 OR6C1Q96RD1 312 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 MCCC1Q96RQ3 725 aaPredicted RBP13.48□□□□□ -0.25
HLA-C-210ENST00000640219 STN1Q9H668 368 aaKnown RBP13.48□□□□□ -0.25
HLA-C-210ENST00000640219 PCDH9Q9HC56 1237 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 SARS2Q9NP81 518 aaKnown RBP13.48□□□□□ -0.25
HLA-C-210ENST00000640219 ASF1BQ9NVP2 202 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 NOVA2Q9UNW9 492 aaKnown RBP13.48□□□□□ -0.25
HLA-C-210ENST00000640219 SLC17A4Q9Y2C5 497 aa13.48□□□□□ -0.25
HLA-C-210ENST00000640219 A0A0J9YYE9 177 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 GMNCA6NCL1 334 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 E7EVH7 732 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 PPP1R12AO14974 1030 aaPredicted RBP13.47□□□□□ -0.25
HLA-C-210ENST00000640219 EML2O95834 649 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 TRBC1P01850 177 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 MT-ND3P03897 115 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 NUDT17P0C025 328 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 PYGMP11217 842 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 NFKB1P19838 968 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 EPHB1P54762 984 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 EPHA4P54764 986 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 POLR2LP62875 67 aaKnown RBP13.47□□□□□ -0.25
HLA-C-210ENST00000640219 GUCY1A3Q02108 690 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 OLIG2Q13516 323 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 IL11RAQ14626 422 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 QPCTQ16769 361 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 HPS6Q86YV9 775 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 RBMXL3Q8N7X1 1067 aaKnown RBP13.47□□□□□ -0.25
HLA-C-210ENST00000640219 PRELID2Q8N945 189 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 EXD1Q8NHP7 514 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 ZNF473Q8WTR7 871 aaKnown RBP13.47□□□□□ -0.25
HLA-C-210ENST00000640219 DTD2Q96FN9 168 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 SCRN2Q96FV2 425 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 RANBP9Q96S59 729 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 LHX9Q9NQ69 397 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 ITGB1BP2Q9UKP3 347 aa13.47□□□□□ -0.25
HLA-C-210ENST00000640219 G3BP2Q9UN86 482 aaKnown RBP13.47□□□□□ -0.25
HLA-C-210ENST00000640219 RGS16O15492 202 aaPredicted RBP13.46□□□□□ -0.25
HLA-C-210ENST00000640219 PMPCBO75439 489 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 SPAG6O75602 509 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 FAM107AO95990 144 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 GAS8O95995 478 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 SOD1P00441 154 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 CYP2A6P11509 494 aaPredicted RBP13.46□□□□□ -0.25
HLA-C-210ENST00000640219 ZFXP17010 805 aaPredicted RBP13.46□□□□□ -0.25
HLA-C-210ENST00000640219 RBL1P28749 1068 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 ATP5DP30049 168 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 ITGA1P56199 1179 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 RPS18P62269 152 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms