RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 FZD5Q13467 585 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 SLBPQ14493 270 aaKnown RBP eCLIP7.9□□□□□ -1.15
SCARB2-220ENST00000640076 PTPRCAPQ14761 206 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 UBXN2BQ14CS0 331 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 SKIDA1Q1XH10 827 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 KBTBD12Q3ZCT8 623 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 ZNF776Q68DI1 518 aaPredicted RBP7.9□□□□□ -1.15
SCARB2-220ENST00000640076 KIAA0930Q6ICG6 404 aaPredicted RBP7.9□□□□□ -1.15
SCARB2-220ENST00000640076 FIP1L1Q6UN15 594 aaKnown RBP7.9□□□□□ -1.15
SCARB2-220ENST00000640076 CRTC1Q6UUV9 634 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 LRIG3Q6UXM1 1119 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 SDCCAG8Q86SQ7 713 aaPredicted RBP7.9□□□□□ -1.15
SCARB2-220ENST00000640076 TSPAN33Q86UF1 283 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 CACUL1Q86Y37 369 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 OR4K2Q8NGD2 314 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 STYXQ8WUJ0 223 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 NANOS1Q8WY41 292 aaKnown RBP7.9□□□□□ -1.15
SCARB2-220ENST00000640076 EID2BQ96D98 161 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 CERS2Q96G23 380 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 CYTH2Q99418 400 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 HDAC8Q9BY41 377 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 GPR63Q9BZJ6 419 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 FOXQ1Q9C009 403 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 UNKQ9C0B0 810 aaKnown RBP7.9□□□□□ -1.15
SCARB2-220ENST00000640076 LMAN1LQ9HAT1 526 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 PLSCR4Q9NRQ2 329 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 POLR3BQ9NW08 1133 aaPredicted RBP7.9□□□□□ -1.15
SCARB2-220ENST00000640076 IL1RAPL1Q9NZN1 696 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 IL17CQ9P0M4 197 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 ITGB1BP2Q9UKP3 347 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 EXOC1LA0A1B0GW35 172 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 FAM170BA6NMN3 283 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 A8MX80 341 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 AGPSO00116 658 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 PLK4O00444 970 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 CCL22O00626 93 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 VAPBO95292 243 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 CLDN7O95471 211 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 BAG2O95816 211 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 ERVK-10P10266 1014 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 ADRB3P13945 408 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 PAMP19021 973 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 VIPR1P32241 457 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 DRD3P35462 400 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 MMP12P39900 470 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 P2RY2P41231 377 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 ARL4DP49703 201 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 SUOXP51687 545 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 MGAT5Q09328 741 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 IFFO1Q0D2I5 559 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 CNTN1Q12860 1018 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 EFTUD2Q15029 972 aaKnown RBP eCLIP7.89□□□□□ -1.15
SCARB2-220ENST00000640076 SMAD1Q15797 465 aaKnown RBP7.89□□□□□ -1.15
SCARB2-220ENST00000640076 CRY1Q16526 586 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 LRRC66Q68CR7 880 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 ERN2Q76MJ5 926 aaKnown RBP7.89□□□□□ -1.15
SCARB2-220ENST00000640076 TMPRSS6Q8IU80 811 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 SLC44A2Q8IWA5 706 aaPredicted RBP7.89□□□□□ -1.15
SCARB2-220ENST00000640076 AADATQ8N5Z0 425 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 OR13C4Q8NGS5 318 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 C17orf50Q8WW18 174 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 HDAC10Q969S8 669 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 ZBTB9Q96C00 473 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 C19orf43Q9BQ61 176 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 CCDC77Q9BR77 488 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 TBC1D17Q9HA65 648 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 PPANQ9NQ55 473 aaKnown RBP7.89□□□□□ -1.15
SCARB2-220ENST00000640076 DYRK4Q9NR20 520 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 C20orf96Q9NUD7 363 aaPredicted RBP7.89□□□□□ -1.15
SCARB2-220ENST00000640076 NLE1Q9NVX2 485 aaPredicted RBP7.89□□□□□ -1.15
SCARB2-220ENST00000640076 GPATCH2Q9NW75 528 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 PRR13Q9NZ81 148 aa7.89□□□□□ -1.15
SCARB2-220ENST00000640076 ZDBF2Q9HCK1 2354 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 TECTAO75443 2155 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 A0A088AWK7 358 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 A0A1W2PPH5 198 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 PGPEP1LA6NFU8 196 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 CXorf49A8MYA2 514 aaPredicted RBP7.88□□□□□ -1.15
SCARB2-220ENST00000640076 STX7O15400 261 aaKnown RBP7.88□□□□□ -1.15
SCARB2-220ENST00000640076 SLC7A4O43246 635 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 RPP40O75818 363 aaKnown RBP7.88□□□□□ -1.15
SCARB2-220ENST00000640076 IVLP07476 585 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 CYP2A6P11509 494 aaPredicted RBP7.88□□□□□ -1.15
SCARB2-220ENST00000640076 GCAP28676 217 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 SLC16A1P53985 500 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 PRAMEP78395 509 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 IRF9Q00978 393 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 PTSQ03393 145 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 RALGDSQ12967 914 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 GAS6Q14393 721 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 KLHL38Q2WGJ6 581 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 HSP90AA5PQ58FG0 334 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 PIP5KL1Q5T9C9 394 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 PDPK2PQ6A1A2 396 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 MICALCLQ6ZW33 695 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 DPPA4Q7L190 304 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 SYT13Q7L8C5 426 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 KCNMB4Q86W47 210 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 LRRC6Q86X45 466 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 CDKN2AIPNLQ96HQ2 116 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms