RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 SOHLH2Q9NX45 425 aa16.42■□□□□ 0.22
SMN2-216ENST00000638794 BTRCQ9Y297 605 aa16.42■□□□□ 0.22
SMN2-216ENST00000638794 PCDHA3Q9Y5H8 950 aa16.42■□□□□ 0.22
SMN2-216ENST00000638794 COLEC10Q9Y6Z7 277 aa16.42■□□□□ 0.22
SMN2-216ENST00000638794 MED13Q9UHV7 2174 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 CCL22O00626 93 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 STK10O94804 968 aaKnown RBP16.41■□□□□ 0.22
SMN2-216ENST00000638794 PDGFAP04085 211 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 POLR2CP19387 275 aaPredicted RBP16.41■□□□□ 0.22
SMN2-216ENST00000638794 ITGALP20701 1170 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 PTPN7P35236 360 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 CYLC1P35663 651 aaPredicted RBP16.41■□□□□ 0.22
SMN2-216ENST00000638794 PDE1BQ01064 536 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 GPS2Q13227 327 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 SEMA5AQ13591 1074 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 IL10RAQ13651 578 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 UBAP2LQ14157 1087 aaKnown RBP16.41■□□□□ 0.22
SMN2-216ENST00000638794 SPARCL1Q14515 664 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 KRT33BQ14525 404 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 UGT8Q16880 541 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 TMTC4Q5T4D3 741 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 DENND5AQ6IQ26 1287 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 DARS2Q6PI48 645 aaKnown RBP16.41■□□□□ 0.22
SMN2-216ENST00000638794 SNX20Q7Z614 316 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 APLFQ8IW19 511 aaPredicted RBP16.41■□□□□ 0.22
SMN2-216ENST00000638794 CARFQ8N187 725 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 TEX19Q8NA77 164 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 SLC38A9Q8NBW4 561 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 OR4E2Q8NGC2 313 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 SEC14L1Q92503 715 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 MR1Q95460 341 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 COPS8Q99627 209 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 TBL1YQ9BQ87 522 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 TLR10Q9BXR5 811 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 KCND1Q9NSA2 647 aa16.41■□□□□ 0.22
SMN2-216ENST00000638794 USP9XQ93008 2570 aaPredicted RBP16.4■□□□□ 0.22
SMN2-216ENST00000638794 SOWAHDA6NJG2 315 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 CFAP99D6REC4 459 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 DDX3YO15523 660 aaKnown RBP16.4■□□□□ 0.22
SMN2-216ENST00000638794 ATP1B2P14415 290 aaPredicted RBP16.4■□□□□ 0.22
SMN2-216ENST00000638794 NDUFS1P28331 727 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 HADHAP40939 763 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 RPS15P62841 145 aaKnown RBP16.4■□□□□ 0.22
SMN2-216ENST00000638794 PRKAA1Q13131 559 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 PRAMEF17Q5VTA0 474 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 CPZQ66K79 652 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 AADACL2Q6P093 401 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 ZNF517Q6ZMY9 492 aaPredicted RBP16.4■□□□□ 0.22
SMN2-216ENST00000638794 MICALCLQ6ZW33 695 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 SYVN1Q86TM6 617 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 ACVR1CQ8NER5 493 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 OR8K5Q8NH50 307 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 MIB2Q96AX9 1013 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 CCM2Q9BSQ5 444 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 COG4Q9H9E3 785 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 ANKMY1Q9P2S6 941 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 POMT2Q9UKY4 750 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 HEBP2Q9Y5Z4 205 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 DUSP10Q9Y6W6 482 aa16.4■□□□□ 0.22
SMN2-216ENST00000638794 CCDC66A2RUB6 948 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 CLEC18AA5D8T8 446 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 SLC9B1P1A6NJY1 282 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 LDB2O43679 373 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 CDH3P22223 829 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 MC4RP32245 332 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 CDKN1CP49918 316 aaPredicted RBP16.39■□□□□ 0.21
SMN2-216ENST00000638794 MLLT10P55197 1068 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 RWDD2BP57060 319 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 ABRQ12979 859 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 CLEC18BQ6UXF7 455 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 CLEC18CQ8NCF0 446 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 HEXDCQ8WVB3 486 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 LCN9Q8WX39 176 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 THAP4Q8WY91 577 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 ALG3Q92685 438 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 DNAJC1Q96KC8 554 aaKnown RBP16.39■□□□□ 0.21
SMN2-216ENST00000638794 PPP1R2P1Q96PQ5 205 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 NRTNQ99748 197 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 C19orf43Q9BQ61 176 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 CHST8Q9H2A9 424 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 OR52A5Q9H2C5 316 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 SRMSQ9H3Y6 488 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 ARNT2Q9HBZ2 717 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 LATS2Q9NRM7 1088 aa16.39■□□□□ 0.21
SMN2-216ENST00000638794 EPN1Q9Y6I3 576 aaPredicted RBP16.39■□□□□ 0.21
SMN2-216ENST00000638794 SEC16AO15027 2179 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 USP9YO00507 2555 aaPredicted RBP16.38■□□□□ 0.21
SMN2-216ENST00000638794 IGLV3-16A0A075B6K0 115 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 NBPF19A0A087WUL8 3843 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 C17orf113A0A1B0GUU1 675 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 GSAPA4D1B5 854 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 TJP3O95049 919 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 PRSS56P0CW18 603 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 ACRV1P26436 265 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 CD97P48960 835 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 NAP1L1P55209 391 aaKnown RBP16.38■□□□□ 0.21
SMN2-216ENST00000638794 CHAF1BQ13112 559 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 GPR33Q49SQ1 333 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 ZNF658BQ4V348 819 aaPredicted RBP16.38■□□□□ 0.21
SMN2-216ENST00000638794 IZUMO3Q5VZ72 239 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms