RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 TMTC4Q5T4D3 741 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 ZNF517Q6ZMY9 492 aaPredicted RBP17.98■□□□□ 0.47
CLN6-220ENST00000637450 ASB18Q6ZVZ8 466 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 SNX20Q7Z614 316 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 NXPE1Q8N323 547 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 TEX19Q8NA77 164 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 OR4E2Q8NGC2 313 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 CCDC110Q8TBZ0 833 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 HM13Q8TCT9 377 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 HEXDCQ8WVB3 486 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 PPM1MQ96MI6 270 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 SPATA13Q96N96 652 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 COPS8Q99627 209 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 FAM118BQ9BPY3 351 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 TBL1YQ9BQ87 522 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 FAM96AQ9H5X1 160 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 BTRCQ9Y297 605 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 HEBP2Q9Y5Z4 205 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 EPN1Q9Y6I3 576 aaPredicted RBP17.98■□□□□ 0.47
CLN6-220ENST00000637450 DUSP10Q9Y6W6 482 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 LRRK2Q5S007 2527 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 MACROD2A1Z1Q3 448 aa17.97■□□□□ 0.47
CLN6-220ENST00000637450 CCDC66A2RUB6 948 aa17.97■□□□□ 0.47
CLN6-220ENST00000637450 CFAP99D6REC4 459 aa17.97■□□□□ 0.47
CLN6-220ENST00000637450 SCRG1O75711 98 aa17.97■□□□□ 0.47
CLN6-220ENST00000637450 POLR2CP19387 275 aaPredicted RBP17.97■□□□□ 0.47
CLN6-220ENST00000637450 ITGALP20701 1170 aa17.97■□□□□ 0.47
CLN6-220ENST00000637450 CTNNA2P26232 953 aa17.97■□□□□ 0.47
CLN6-220ENST00000637450 HADHAP40939 763 aa17.97■□□□□ 0.47
CLN6-220ENST00000637450 ARCN1P48444 511 aaKnown RBP17.97■□□□□ 0.47
CLN6-220ENST00000637450 RWDD2BP57060 319 aa17.97■□□□□ 0.47
CLN6-220ENST00000637450 RPS15P62841 145 aaKnown RBP17.97■□□□□ 0.47
CLN6-220ENST00000637450 SRSF1Q07955 248 aaKnown RBP eCLIP17.97■□□□□ 0.47
CLN6-220ENST00000637450 KRT33BQ14525 404 aa17.97■□□□□ 0.47
CLN6-220ENST00000637450 FBXO38Q6PIJ6 1188 aa17.97■□□□□ 0.47
CLN6-220ENST00000637450 TMEM126BQ8IUX1 230 aa17.97■□□□□ 0.47
CLN6-220ENST00000637450 KLHDC8BQ8IXV7 354 aa17.97■□□□□ 0.47
CLN6-220ENST00000637450 SLC38A9Q8NBW4 561 aa17.97■□□□□ 0.47
CLN6-220ENST00000637450 THAP4Q8WY91 577 aa17.97■□□□□ 0.47
CLN6-220ENST00000637450 PPP1R2P1Q96PQ5 205 aa17.97■□□□□ 0.47
CLN6-220ENST00000637450 LATS2Q9NRM7 1088 aa17.97■□□□□ 0.47
CLN6-220ENST00000637450 FEZ2Q9UHY8 353 aaPredicted RBP17.97■□□□□ 0.47
CLN6-220ENST00000637450 FARSAQ9Y285 508 aaKnown RBP17.97■□□□□ 0.47
CLN6-220ENST00000637450 CLEC18AA5D8T8 446 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 LDB2O43679 373 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 RPS18P62269 152 aaKnown RBP17.96■□□□□ 0.47
CLN6-220ENST00000637450 PRKAA1Q13131 559 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 GPS2Q13227 327 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 SPARCL1Q14515 664 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 GPR33Q49SQ1 333 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 ZNF658BQ4V348 819 aaPredicted RBP17.96■□□□□ 0.47
CLN6-220ENST00000637450 AADACL2Q6P093 401 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 CLEC18BQ6UXF7 455 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 SYVN1Q86TM6 617 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 CLEC18CQ8NCF0 446 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 ACVR1CQ8NER5 493 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 LCN9Q8WX39 176 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 ALG3Q92685 438 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 MIB2Q96AX9 1013 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 LRFN5Q96NI6 719 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 PANX2Q96RD6 677 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 C1GALT1Q9NS00 363 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 SOHLH2Q9NX45 425 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 ZDHHC3Q9NYG2 299 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 POMT2Q9UKY4 750 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 PLAAQ9Y263 795 aa17.96■□□□□ 0.47
CLN6-220ENST00000637450 IGLV3-16A0A075B6K0 115 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 TRBV5-4A0A0C4DH59 114 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 SOWAHDA6NJG2 315 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 SLC9B1P1A6NJY1 282 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 BTNL10A8MVZ5 291 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 MATN2O00339 956 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 CCL22O00626 93 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 DNAJB5O75953 348 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 TJP3O95049 919 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 PDGFAP04085 211 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 CDH3P22223 829 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 MC4RP32245 332 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 CETN2P41208 172 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 CDKN1CP49918 316 aaPredicted RBP17.95■□□□□ 0.46
CLN6-220ENST00000637450 NAP1L1P55209 391 aaKnown RBP17.95■□□□□ 0.46
CLN6-220ENST00000637450 IZUMO3Q5VZ72 239 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 MR1Q95460 341 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 DNAJC1Q96KC8 554 aaKnown RBP17.95■□□□□ 0.46
CLN6-220ENST00000637450 FERD3LQ96RJ6 166 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 TRIM55Q9BYV6 548 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 OR52A5Q9H2C5 316 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 SRMSQ9H3Y6 488 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 COG4Q9H9E3 785 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 ANKMY1Q9P2S6 941 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 DOPEY2Q9Y3R5 2298 aa17.95■□□□□ 0.46
CLN6-220ENST00000637450 H7C0S8 307 aa17.94■□□□□ 0.46
CLN6-220ENST00000637450 ZNF189O75820 626 aaPredicted RBP17.94■□□□□ 0.46
CLN6-220ENST00000637450 KLK3P07288 261 aaPredicted RBP17.94■□□□□ 0.46
CLN6-220ENST00000637450 ACRV1P26436 265 aa17.94■□□□□ 0.46
CLN6-220ENST00000637450 PRDX3P30048 256 aaKnown RBP17.94■□□□□ 0.46
CLN6-220ENST00000637450 CD151P48509 253 aa17.94■□□□□ 0.46
CLN6-220ENST00000637450 CD97P48960 835 aa17.94■□□□□ 0.46
CLN6-220ENST00000637450 GSDMDP57764 484 aa17.94■□□□□ 0.46
CLN6-220ENST00000637450 IL10RAQ13651 578 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms