RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 NCKIPSDQ9NZQ3 722 aa15.66■□□□□ 0.1
CLN6-216ENST00000636876 SCHIP1Q9P0W5 487 aaPredicted RBP15.66■□□□□ 0.1
CLN6-216ENST00000636876 WDR37Q9Y2I8 494 aa15.66■□□□□ 0.1
CLN6-216ENST00000636876 MTO1Q9Y2Z2 717 aaKnown RBP15.66■□□□□ 0.1
CLN6-216ENST00000636876 COL5A1P20908 1838 aaPredicted RBP15.66■□□□□ 0.1
CLN6-216ENST00000636876 CNOT1A5YKK6 2376 aaKnown RBP15.65■□□□□ 0.1
CLN6-216ENST00000636876 ACACBO00763 2458 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 TRBV23OR9-2A0A075B6M9 112 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 LY6G6EA0A0G2JKS1 128 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 KIR2DS5A0A0G2JLQ3 304 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 A0A0G2JNG1 304 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 POC1B-GALNT4F8VUJ3 575 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 KIR2DS3K7RE56 304 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 SLC30A4O14863 429 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 LDOC1O95751 146 aaPredicted RBP15.65■□□□□ 0.1
CLN6-216ENST00000636876 INHBAP08476 426 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 FDXRP22570 491 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 SKIV2L2P42285 1042 aaKnown RBP15.65■□□□□ 0.1
CLN6-216ENST00000636876 MSH2P43246 934 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 RPIAP49247 311 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 MAZP56270 477 aaKnown RBP15.65■□□□□ 0.1
CLN6-216ENST00000636876 TAS2R39P59534 338 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 KIR2DS5Q14953 304 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 CLCA4Q14CN2 919 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 NR0B2Q15466 257 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 TTLL9Q3SXZ7 439 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 C14orf28Q4W4Y0 310 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 CAPRIN2Q6IMN6 1127 aaKnown RBP15.65■□□□□ 0.1
CLN6-216ENST00000636876 UGT3A1Q6NUS8 523 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 PDZD3Q86UT5 571 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 PIM3Q86V86 326 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 VRK3Q8IV63 474 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 SLC22A15Q8IZD6 547 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 SPDYE1Q8NFV5 336 aaPredicted RBP15.65■□□□□ 0.1
CLN6-216ENST00000636876 MAPK15Q8TD08 544 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 SLC37A2Q8TED4 501 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 INPP5DQ92835 1189 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 CNDP2Q96KP4 475 aaKnown RBP15.65■□□□□ 0.1
CLN6-216ENST00000636876 CDC6Q99741 560 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 CCDC77Q9BR77 488 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 FTSJ1Q9UET6 329 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 TRMT6Q9UJA5 497 aaKnown RBP15.65■□□□□ 0.1
CLN6-216ENST00000636876 CDV3Q9UKY7 258 aaKnown RBP15.65■□□□□ 0.1
CLN6-216ENST00000636876 IKBKGQ9Y6K9 419 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 U3KQA8 63 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 PCNX2A6NKB5 2137 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 EPG5Q9HCE0 2579 aa15.65■□□□□ 0.1
CLN6-216ENST00000636876 CCDC151A5D8V7 595 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 OR52A4PA6NMU1 304 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 TM4SF5O14894 197 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 ERLIN1O75477 346 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 ITGA2BP08514 1039 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 MYF5P13349 255 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 ATP5DP30049 168 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 SLC19A1P41440 591 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 MAP1BP46821 2468 aaKnown RBP15.64■□□□□ 0.09
CLN6-216ENST00000636876 SERPINB9P50453 376 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 UBE2IP63279 158 aaKnown RBP15.64■□□□□ 0.09
CLN6-216ENST00000636876 POU4F1Q01851 419 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 RPE65Q16518 533 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 ACSBG2Q5FVE4 666 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 SPNS2Q8IVW8 549 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 ARL14Q8N4G2 192 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 DCAKDQ8WVC6 231 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 C12orf66Q96MD2 445 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 INSM2Q96T92 566 aaPredicted RBP15.64■□□□□ 0.09
CLN6-216ENST00000636876 DHRS4Q9BTZ2 278 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 DLL3Q9NYJ7 618 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 ZNF624Q9P2J8 865 aaPredicted RBP15.64■□□□□ 0.09
CLN6-216ENST00000636876 FETUBQ9UGM5 382 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 ZNF180Q9UJW8 692 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 SLC39A10Q9ULF5 831 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 PADI4Q9UM07 663 aa15.64■□□□□ 0.09
CLN6-216ENST00000636876 IFRD1O00458 451 aaPredicted RBP15.63■□□□□ 0.09
CLN6-216ENST00000636876 SHBGP04278 402 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 MTHFD1P11586 935 aaKnown RBP15.63■□□□□ 0.09
CLN6-216ENST00000636876 CKMT1AP12532 417 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 XRCC1P18887 633 aaPredicted RBP15.63■□□□□ 0.09
CLN6-216ENST00000636876 SAT1P21673 171 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 ACADLP28330 430 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 GCAP28676 217 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 DUSP3P51452 185 aaPredicted RBP15.63■□□□□ 0.09
CLN6-216ENST00000636876 SLC12A2P55011 1212 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 DAB2P98082 770 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 PDAP1Q13442 181 aaKnown RBP15.63■□□□□ 0.09
CLN6-216ENST00000636876 PUM1Q14671 1186 aaKnown RBP eCLIP15.63■□□□□ 0.09
CLN6-216ENST00000636876 USP10Q14694 798 aaKnown RBP15.63■□□□□ 0.09
CLN6-216ENST00000636876 RSPO4Q2I0M5 234 aaPredicted RBP15.63■□□□□ 0.09
CLN6-216ENST00000636876 PAQR3Q6TCH7 311 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 TAOK1Q7L7X3 1001 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 SLC9B2Q86UD5 537 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 TRIM48Q8IWZ4 208 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 CPNE9Q8IYJ1 553 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 AVL9Q8NBF6 648 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 DEFB124Q8NES8 71 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 CXorf40BQ96DE9 158 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 TSPAN17Q96FV3 270 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 POPDC3Q9HBV1 291 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 IMP3Q9NV31 184 aaKnown RBP15.63■□□□□ 0.09
CLN6-216ENST00000636876 EVA1BQ9NVM1 165 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms