RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ZNF653Q96CK0 615 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 TAAR6Q96RI8 345 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 IFT80Q9P2H3 777 aaPredicted RBP17.58■□□□□ 0.4
CLN6-212ENST00000636020 NDOR1Q9UHB4 597 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 CDYLQ9Y232 598 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 NEU2Q9Y3R4 380 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 NUP210LQ5VU65 1888 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 ACANP16112 2415 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 NCOA6Q14686 2063 aaPredicted RBP17.57■□□□□ 0.4
CLN6-212ENST00000636020 ALOX12BO75342 701 aa17.57■□□□□ 0.4
CLN6-212ENST00000636020 MMP2P08253 660 aa17.57■□□□□ 0.4
CLN6-212ENST00000636020 CD99P14209 185 aa17.57■□□□□ 0.4
CLN6-212ENST00000636020 AGAP20933 346 aa17.57■□□□□ 0.4
CLN6-212ENST00000636020 DCDP81605 110 aaKnown RBP17.57■□□□□ 0.4
CLN6-212ENST00000636020 ADORA2A-AS1P86434 159 aa17.57■□□□□ 0.4
CLN6-212ENST00000636020 PRKAA1Q13131 559 aa17.57■□□□□ 0.4
CLN6-212ENST00000636020 C1orf189Q5VU69 101 aa17.57■□□□□ 0.4
CLN6-212ENST00000636020 METRNLQ641Q3 311 aa17.57■□□□□ 0.4
CLN6-212ENST00000636020 RHBDD2Q6NTF9 364 aa17.57■□□□□ 0.4
CLN6-212ENST00000636020 CHTF18Q8WVB6 975 aa17.57■□□□□ 0.4
CLN6-212ENST00000636020 NACC2Q96BF6 587 aa17.57■□□□□ 0.4
CLN6-212ENST00000636020 MTFMTQ96DP5 389 aaKnown RBP17.57■□□□□ 0.4
CLN6-212ENST00000636020 ADGRE3Q9BY15 652 aa17.57■□□□□ 0.4
CLN6-212ENST00000636020 TAS2R14Q9NYV8 317 aa17.57■□□□□ 0.4
CLN6-212ENST00000636020 H3BMH7 237 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 FAM155BO75949 473 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 HLA-DQB2P05538 268 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 PIRTP0C851 137 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 HLA-DPA1P20036 260 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 PRDX3P30048 256 aaKnown RBP17.56■□□□□ 0.4
CLN6-212ENST00000636020 CTSCP53634 463 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 CDSNQ15517 529 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.56■□□□□ 0.4
CLN6-212ENST00000636020 ATP13A5Q4VNC0 1218 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 BOLA3Q53S33 107 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 ZFYVE27Q5T4F4 411 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 IRAK1BP1Q5VVH5 260 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 CDHR3Q6ZTQ4 885 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 CEP97Q8IW35 865 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 GPR135Q8IZ08 494 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 OR4E2Q8NGC2 313 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 OR1N1Q8NGS0 311 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 PROKR1Q8TCW9 393 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 BRSK1Q8TDC3 778 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 TEKT4Q8WW24 435 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 HSPH1Q92598 858 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 FATE1Q969F0 183 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 C12orf66Q96MD2 445 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 TTC25Q96NG3 672 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 SPOCK3Q9BQ16 436 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 PITPNM3Q9BZ71 974 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 MAGEE1Q9HCI5 957 aa17.56■□□□□ 0.4
CLN6-212ENST00000636020 DNMT3AQ9Y6K1 912 aaPredicted RBP17.56■□□□□ 0.4
CLN6-212ENST00000636020 MATN2O00339 956 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 MAP3K7O43318 606 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 UNC5CO95185 931 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 SLC4A1P02730 911 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 ATXN8OSP0DMR3 200 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 TCF4P15884 667 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 MMP11P24347 488 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 PCK1P35558 622 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 ANP32AP39687 249 aaKnown RBP17.55■□□□□ 0.4
CLN6-212ENST00000636020 CD86P42081 329 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 ART1P52961 327 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 Q0VFX4 171 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 GALNT2Q10471 571 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 SLC9A5Q14940 896 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 TIGD7Q6NT04 549 aaPredicted RBP17.55■□□□□ 0.4
CLN6-212ENST00000636020 ISLR2Q6UXK2 745 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 RASGEF1AQ8N9B8 481 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 GDAP1Q8TB36 358 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 MAGEB10Q96LZ2 347 aaPredicted RBP17.55■□□□□ 0.4
CLN6-212ENST00000636020 LMF1Q96S06 567 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 AP1M1Q9BXS5 423 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 XPO4Q9C0E2 1151 aaKnown RBP17.55■□□□□ 0.4
CLN6-212ENST00000636020 LHPPQ9H008 270 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 WWP1Q9H0M0 922 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.55■□□□□ 0.4
CLN6-212ENST00000636020 HAUS2Q9NVX0 235 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 TAB2Q9NYJ8 693 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 ZNF711Q9Y462 761 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 AP1M2Q9Y6Q5 423 aa17.55■□□□□ 0.4
CLN6-212ENST00000636020 CCNCP24863 283 aa17.54■□□□□ 0.4
CLN6-212ENST00000636020 MFAP5Q13361 173 aa17.54■□□□□ 0.4
CLN6-212ENST00000636020 BECN1Q14457 450 aa17.54■□□□□ 0.4
CLN6-212ENST00000636020 TCP11X2Q5H9J9 407 aa17.54■□□□□ 0.4
CLN6-212ENST00000636020 TMEM220Q6QAJ8 160 aa17.54■□□□□ 0.4
CLN6-212ENST00000636020 LINC00696Q6ZRV3 163 aa17.54■□□□□ 0.4
CLN6-212ENST00000636020 ACBD4Q8NC06 268 aa17.54■□□□□ 0.4
CLN6-212ENST00000636020 SPDYE1Q8NFV5 336 aaPredicted RBP17.54■□□□□ 0.4
CLN6-212ENST00000636020 TSGA13Q96PP4 275 aa17.54■□□□□ 0.4
CLN6-212ENST00000636020 TRIB3Q96RU7 358 aa17.54■□□□□ 0.4
CLN6-212ENST00000636020 GPR63Q9BZJ6 419 aa17.54■□□□□ 0.4
CLN6-212ENST00000636020 SPRTNQ9H040 489 aaPredicted RBP17.54■□□□□ 0.4
CLN6-212ENST00000636020 KLHL25Q9H0H3 589 aa17.54■□□□□ 0.4
CLN6-212ENST00000636020 PCDH18Q9HCL0 1135 aa17.54■□□□□ 0.4
CLN6-212ENST00000636020 SAMSN1Q9NSI8 373 aaKnown RBP17.54■□□□□ 0.4
CLN6-212ENST00000636020 SH3BGRL2Q9UJC5 107 aa17.54■□□□□ 0.4
CLN6-212ENST00000636020 PRRC2AP48634 2157 aaKnown RBP17.53■□□□□ 0.4
CLN6-212ENST00000636020 FAM221AA4D161 298 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms