RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 LRRTM4Q86VH4 590 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 ATCAYQ86WG3 371 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 CREG2Q8IUH2 290 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 OR4K2Q8NGD2 314 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 GLYATL1Q969I3 302 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 C16orf45Q96MC5 204 aaPredicted RBP15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 TWSG1Q9GZX9 223 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 UCK1Q9HA47 277 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 LRRC4CQ9HCJ2 640 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 KCND3Q9UK17 655 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 PADI1Q9ULC6 663 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 OR52A4PA6NMU1 304 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 AP3B1O00203 1094 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 FANCGO15287 622 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 SPAG6O75602 509 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 CDK14O94921 469 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 LAMB3Q13751 1172 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 ITGA9Q13797 1035 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 TCTN3Q6NUS6 607 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 LURAP1LQ8IV03 231 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 GDAP1Q8TB36 358 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 DTX3LQ8TDB6 740 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 RSC1A1Q92681 617 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 MIB2Q96AX9 1013 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 CXorf40BQ96DE9 158 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 ZDHHC12Q96GR4 267 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 RUNDC3BQ96NL0 473 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 VPS35Q96QK1 796 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 DDX47Q9H0S4 455 aaKnown RBP15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 ZNF768Q9H5H4 540 aaKnown RBP15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 IL26Q9NPH9 171 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 TLK1Q9UKI8 766 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 NBASA2RRP1 2371 aa15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 TNRC6AQ8NDV7 1962 aaKnown RBP15.22■□□□□ 0.03
SNRNP48-203ENST00000634363 CLEC18AA5D8T8 446 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 CCDC188H7C350 402 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 CHUKO15111 745 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 TOX3O15405 576 aaPredicted RBP15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 LDB2O43679 373 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 CREG1O75629 220 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 PRAMEF1O95521 474 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 TPSB2P20231 275 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 IDSP22304 550 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 GRIA1P42261 906 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 ZNF140P52738 457 aaPredicted RBP15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 TERF1P54274 439 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 SARNPP82979 210 aaKnown RBP15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 TMPRSS15P98073 1019 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 CDK16Q00536 496 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 MSLNQ13421 630 aaPredicted RBP15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 GPR18Q14330 331 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 PTPRCAPQ14761 206 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 TPSAB1Q15661 275 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 CHRNA6Q15825 494 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 ATP13A5Q4VNC0 1218 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 C4orf17Q53FE4 359 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 CLEC18BQ6UXF7 455 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 PPP1R3BQ86XI6 285 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 CLEC18CQ8NCF0 446 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 OR13C4Q8NGS5 318 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 C19orf43Q9BQ61 176 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 ZCCHC2Q9C0B9 1178 aaKnown RBP15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 SLC40A1Q9NP59 571 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 CASS4Q9NQ75 786 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 FKBPLQ9UIM3 349 aa15.21■□□□□ 0.03
SNRNP48-203ENST00000634363 HEATR9A2RTY3 570 aa15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 GPR89AB7ZAQ6 455 aa15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 RFPL1O75677 317 aa15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 DNAJB5O75953 348 aa15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 GPR89BP0CG08 455 aa15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 FGF5P12034 268 aa15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 BRAFP15056 766 aa15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 DNASE1L3Q13609 305 aa15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 GTF2H3Q13889 308 aa15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 KCTD19Q17RG1 926 aaPredicted RBP15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 ABRAXAS1Q6UWZ7 409 aa15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 KLHL7Q8IXQ5 586 aa15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 PPHLN1Q8NEY8 458 aaKnown RBP15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 STYXQ8WUJ0 223 aa15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 DNAJC1Q96KC8 554 aaKnown RBP15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 TTC25Q96NG3 672 aa15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 PSMG3-AS1Q96PY0 264 aa15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 PDE7BQ9NP56 450 aa15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 ASIC3Q9UHC3 531 aa15.2■□□□□ 0.02
SNRNP48-203ENST00000634363 CCDC78A2IDD5 438 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 TTLL8A6PVC2 850 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 VEGFDO43915 354 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 VPS4BO75351 444 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 SRP72O76094 671 aaKnown RBP15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 TIAF1O95411 115 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 MT-ND3P03897 115 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 ITGALP20701 1170 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 SESN2P58004 480 aaPredicted RBP15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 KCNAB1Q14722 419 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 KHDC1Q4VXA5 237 aaKnown RBP15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 CCDC38Q502W7 563 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 LDLRAP1Q5SW96 308 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 FAM199XQ6PEV8 388 aaPredicted RBP15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 TRAPPC5Q8IUR0 188 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms