RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 HMBSP08397 361 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 CEACAM1P13688 526 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 GABRB1P18505 474 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 TYMPP19971 482 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 CA6P23280 308 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 CEACAM8P31997 349 aaPredicted RBP2.99□□□□□ -1.93
SRP54-214ENST00000630962 BMXP51813 675 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 SIRPAP78324 504 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 C15orf59Q2T9L4 293 aaPredicted RBP2.99□□□□□ -1.93
SRP54-214ENST00000630962 GTDC1Q4AE62 458 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 C14orf177Q52M58 125 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 PLEKHS1Q5SXH7 462 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 C4orf50Q6ZRC1 276 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 MARVELD2Q8N4S9 558 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 WDTC1Q8N5D0 677 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 MOSPD2Q8NHP6 518 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 TBC1D16Q8TBP0 767 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 SAT2Q96F10 170 aaPredicted RBP2.99□□□□□ -1.93
SRP54-214ENST00000630962 FAM81BQ96LP2 452 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 NEK1Q96PY6 1258 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 MYADMQ96S97 322 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 TREX2Q9BQ50 279 aaPredicted RBP2.99□□□□□ -1.93
SRP54-214ENST00000630962 ITPAQ9BY32 194 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 UBXN6Q9BZV1 441 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 HRH4Q9H3N8 390 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 DISP3Q9P2K9 1392 aa2.99□□□□□ -1.93
SRP54-214ENST00000630962 SMCHD1A6NHR9 2005 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 ZNF541Q9H0D2 1346 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 IGHV4-4A0A075B6R2 117 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 A0A087WW49 117 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 PLOD2O00469 737 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 KLF11O14901 512 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 ZNF500O60304 480 aaPredicted RBP2.98□□□□□ -1.93
SRP54-214ENST00000630962 SYNCRIPO60506 623 aaKnown RBP2.98□□□□□ -1.93
SRP54-214ENST00000630962 PRAMEF11O60813 436 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 RNASEH1O60930 286 aaKnown RBP2.98□□□□□ -1.93
SRP54-214ENST00000630962 PRKRAO75569 313 aaKnown RBP2.98□□□□□ -1.93
SRP54-214ENST00000630962 TSPAN9O75954 239 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 RSL1D1O76021 490 aaKnown RBP2.98□□□□□ -1.93
SRP54-214ENST00000630962 TRIM49P0CI25 452 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 TRIM49CP0CI26 452 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 PRLRP16471 622 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 CEBPBP17676 345 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 TM4SF1P30408 202 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 WNT5AP41221 380 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 TAF6P49848 677 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 THOP1P52888 689 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 DCAF7P61962 342 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 PPARDQ03181 441 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 LGALS3BPQ08380 585 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 MELKQ14680 651 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 ARHGEF16Q5VV41 709 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 DHRS7BQ6IAN0 325 aaPredicted RBP2.98□□□□□ -1.93
SRP54-214ENST00000630962 MAATS1Q7Z4T9 603 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 CPSF7Q8N684 471 aaKnown RBP2.98□□□□□ -1.93
SRP54-214ENST00000630962 SUSD6Q92537 303 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 DAZLQ92904 295 aaKnown RBP2.98□□□□□ -1.93
SRP54-214ENST00000630962 ERLEC1Q96DZ1 483 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 CEP295NLQ96MC4 621 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 SEPT11Q9NVA2 429 aaKnown RBP2.98□□□□□ -1.93
SRP54-214ENST00000630962 ATAD3AQ9NVI7 634 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 PTTG2Q9NZH5 202 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 PCDHGA5Q9Y5G8 931 aa2.98□□□□□ -1.93
SRP54-214ENST00000630962 SPIN1Q9Y657 262 aaPredicted RBP2.98□□□□□ -1.93
SRP54-214ENST00000630962 IGKV3D-20A0A0C4DH25 116 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 A0A0J9YWU9 116 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 B4DLN1 442 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 PTGES3LE9PB15 166 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 AP3D1O14617 1153 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 SLC22A2O15244 555 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 ATP6V0E1O15342 81 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 GCNT3O95395 438 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 CD48P09326 243 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 GJA1P17302 382 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 EFNA1P20827 205 aaPredicted RBP2.97□□□□□ -1.93
SRP54-214ENST00000630962 NMBRP28336 390 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 MAP2K2P36507 400 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 MRPL12P52815 198 aaKnown RBP2.97□□□□□ -1.93
SRP54-214ENST00000630962 MFAP4P55083 255 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 CDH11P55287 796 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 SNRPD1P62314 119 aaKnown RBP2.97□□□□□ -1.93
SRP54-214ENST00000630962 GPR17Q13304 367 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 RRS1Q15050 365 aaKnown RBP2.97□□□□□ -1.93
SRP54-214ENST00000630962 PDLIM3Q53GG5 364 aaPredicted RBP2.97□□□□□ -1.93
SRP54-214ENST00000630962 MDH1BQ5I0G3 518 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 TCTE1Q5JU00 501 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 KRT79Q5XKE5 535 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 KIAA0930Q6ICG6 404 aaPredicted RBP2.97□□□□□ -1.93
SRP54-214ENST00000630962 PSRC1Q6PGN9 363 aaPredicted RBP2.97□□□□□ -1.93
SRP54-214ENST00000630962 TMCO3Q6UWJ1 677 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 TTC39CQ8N584 583 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 NIPA2Q8N8Q9 360 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 BMPERQ8N8U9 685 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 MCUQ8NE86 351 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 OR1J1Q8NGS3 322 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 HSD17B8Q92506 261 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 SENP5Q96HI0 755 aaPredicted RBP2.97□□□□□ -1.93
SRP54-214ENST00000630962 POM121L2Q96KW2 1035 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 ZNF599Q96NL3 588 aa2.97□□□□□ -1.93
SRP54-214ENST00000630962 PANK2Q9BZ23 570 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms