RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 RAB11FIP2Q7L804 512 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 PHACTR4Q8IZ21 702 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 LRRC71Q8N4P6 559 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 SLC35B2Q8TB61 432 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 ZNF341Q9BYN7 854 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 POLR2J2Q9GZM3 115 aaKnown RBP6.33□□□□□ -1.4
ERCC6-209ENST00000623073 XPNPEP1Q9NQW7 623 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 SLC17A7Q9P2U7 560 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 PPM1HQ9ULR3 514 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 COQ4Q9Y3A0 265 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 MID1O15344 667 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 SSX5O60225 188 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 UPK1BO75841 260 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 LCP1P13796 627 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 HPGDP15428 266 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 CEBPGP53567 150 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 AP1S1P61966 158 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 EN1Q05925 392 aaPredicted RBP6.33□□□□□ -1.4
ERCC6-209ENST00000623073 NIPAL4Q0D2K0 466 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 CCNIQ14094 377 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 GRM2Q14416 872 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 ZNF267Q14586 743 aaPredicted RBP6.33□□□□□ -1.4
ERCC6-209ENST00000623073 UGT3A2Q3SY77 523 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 GCNT6Q5T4J0 391 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 REP15Q6BDI9 236 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 TXNDC5Q8NBS9 432 aaKnown RBP6.33□□□□□ -1.4
ERCC6-209ENST00000623073 OR7G3Q8NG95 312 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 METTL2AQ96IZ6 378 aaKnown RBP6.33□□□□□ -1.4
ERCC6-209ENST00000623073 PAK1IP1Q9NWT1 392 aaPredicted RBP6.33□□□□□ -1.4
ERCC6-209ENST00000623073 MRTO4Q9UKD2 239 aaKnown RBP6.33□□□□□ -1.4
ERCC6-209ENST00000623073 ITSN1Q15811 1721 aa6.33□□□□□ -1.4
ERCC6-209ENST00000623073 BHMG1C9JSJ3 638 aaPredicted RBP6.32□□□□□ -1.4
ERCC6-209ENST00000623073 ALX3O95076 343 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 UCHL1P09936 223 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 ZNF37AP17032 561 aaPredicted RBP6.32□□□□□ -1.4
ERCC6-209ENST00000623073 GKP32189 559 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 RAP2BP61225 183 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 GRSF1Q12849 480 aaKnown RBP eCLIP6.32□□□□□ -1.4
ERCC6-209ENST00000623073 BAMBIQ13145 260 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 SEMA5AQ13591 1074 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 SSX2Q16385 188 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 FAM69AQ5T7M9 428 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 LCN8Q6JVE9 175 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 TFAP2DQ7Z6R9 452 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 MARCH10Q8NA82 808 aaPredicted RBP6.32□□□□□ -1.4
ERCC6-209ENST00000623073 UXS1Q8NBZ7 420 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 DNERQ8NFT8 737 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 GIMAP5Q96F15 307 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 TBC1D24Q9ULP9 559 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 PCDHB3Q9Y5E6 796 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 XPNPEP2O43895 674 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 ZNF3P17036 446 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 RPS3P23396 243 aaKnown RBP eCLIP6.32□□□□□ -1.4
ERCC6-209ENST00000623073 FBXW4P57775 412 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 SH3PXD2AQ5TCZ1 1133 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 CPT1BQ92523 772 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 ZNF641Q96N77 438 aaPredicted RBP6.32□□□□□ -1.4
ERCC6-209ENST00000623073 PNMA5Q96PV4 448 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 CD163L1Q9NR16 1453 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 CLDN24A6NM45 220 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 CXCR6O00574 342 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 AURKAO14965 403 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 ARPC2O15144 300 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 KDM4BO94953 1096 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 PRPS1L1P21108 318 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 GTF2E2P29084 291 aaKnown RBP6.32□□□□□ -1.4
ERCC6-209ENST00000623073 CD81P60033 236 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 ADGRF2Q8IZF7 708 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 TPD52L3Q96J77 140 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 FAM84BQ96KN1 310 aaPredicted RBP6.32□□□□□ -1.4
ERCC6-209ENST00000623073 OR2M2Q96R28 347 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 CBWD1Q9BRT8 395 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 ACOT13Q9NPJ3 140 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 TMEM260Q9NX78 707 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 CNOT6Q9ULM6 557 aaKnown RBP6.32□□□□□ -1.4
ERCC6-209ENST00000623073 CMAHPQ9Y471 501 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 CNTRLQ7Z7A1 2325 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 UNC13AQ9UPW8 1703 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 ESR1P03372 595 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 RPL17P18621 184 aaKnown RBP6.32□□□□□ -1.4
ERCC6-209ENST00000623073 CSTF2P33240 577 aaKnown RBP eCLIP6.32□□□□□ -1.4
ERCC6-209ENST00000623073 MAPK10P53779 464 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 CDH13P55290 713 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 ZNF630Q2M218 657 aaPredicted RBP6.32□□□□□ -1.4
ERCC6-209ENST00000623073 C6orf141Q5SZD1 244 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 NCEH1Q6PIU2 408 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 OR8J1Q8NGP2 316 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 CRAMP1Q96RY5 1269 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 CTRCQ99895 268 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 NANSQ9NR45 359 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 OAZ3Q9UMX2 235 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 NKRFO15226 690 aaKnown RBP eCLIP6.32□□□□□ -1.4
ERCC6-209ENST00000623073 PRODHO43272 600 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 FOXN2P32314 431 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 CDKN2BP42772 138 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 AFF1P51825 1210 aaKnown RBP6.32□□□□□ -1.4
ERCC6-209ENST00000623073 RAB8AP61006 207 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 METTL11BQ5VVY1 283 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 LGALS12Q96DT0 336 aa6.32□□□□□ -1.4
ERCC6-209ENST00000623073 MAELQ96JY0 434 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms