RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 TMED2Q15363 201 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 ANKRD20A4Q4UJ75 823 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 RNF187Q5TA31 235 aaPredicted RBP13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 CAPRIN2Q6IMN6 1127 aaKnown RBP13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 ARMC6Q6NXE6 501 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 IGF2-ASQ6U949 168 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 NAPRTQ6XQN6 538 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 HOOK3Q86VS8 718 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 ZNF248Q8NDW4 579 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 SNIP1Q8TAD8 396 aaKnown RBP13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 GSDMBQ8TAX9 411 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 RSC1A1Q92681 617 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 STAMBPL1Q96FJ0 436 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 ZDHHC12Q96GR4 267 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 PRR11Q96HE9 360 aaPredicted RBP13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 PANX3Q96QZ0 392 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 TRIM56Q9BRZ2 755 aaKnown RBP13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 TRIM31Q9BZY9 425 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 OR52A5Q9H2C5 316 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 OGFRQ9NZT2 677 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 EFCAB7A8K855 629 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 EFCAB8A8MWE9 144 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 USP1O94782 785 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 APOA4P06727 396 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 CCL4P13236 92 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 ARNTP27540 789 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 SLC5A2P31639 672 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 EIF2S3P41091 472 aaKnown RBP13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 ETV5P41161 510 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 CD151P48509 253 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 HSPA14Q0VDF9 509 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 BBS9Q3SYG4 887 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 NEPROQ6NW34 567 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 XKR5Q6UX68 686 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 FAM92BQ6ZTR7 304 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 PDZD3Q86UT5 571 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 OOSP2Q86WS3 158 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 LRRC6Q86X45 466 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 KRT222Q8N1A0 295 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 PHC3Q8NDX5 983 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 ACVR1CQ8NER5 493 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 HNRNPLLQ8WVV9 542 aaKnown RBP13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 ZFPM2Q8WW38 1151 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 KCNE4Q8WWG9 221 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 TFGQ92734 400 aaPredicted RBP13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 USP7Q93009 1102 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 TRIM44Q96DX7 344 aaPredicted RBP13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 C9orf72Q96LT7 481 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 KIR3DX1Q9H7L2 352 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 C20orf96Q9NUD7 363 aaPredicted RBP13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 IL1RAPL1Q9NZN1 696 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 SLC24A2Q9UI40 661 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 ASF1AQ9Y294 204 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 MN1Q10571 1320 aaPredicted RBP13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 WDFY3Q8IZQ1 3526 aa13.63□□□□□ -0.23
PCDHGC3-208ENST00000622836 OR6C74A6NCV1 312 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 IQCF5A8MTL0 148 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 CDRT15L2A8MXV6 281 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 SMAPO00193 183 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 PGAM1P18669 254 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 OGNP20774 298 aaKnown RBP13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 FMO4P31512 558 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 CCR7P32248 378 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 MAGEA3P43357 314 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 ABCG1P45844 678 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 LEPRP48357 1165 aaKnown RBP13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 ARCN1P48444 511 aaKnown RBP13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 SEPHS1P49903 392 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 ITGA8P53708 1063 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 DHX9Q08211 1270 aaKnown RBP13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 C2orf54Q08AI8 447 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 PRKAA1Q13131 559 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 MORF4L2Q15014 288 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 LONRF1Q17RB8 773 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 ZNF658BQ4V348 819 aaPredicted RBP13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 CACHD1Q5VU97 1274 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 ZNF470Q6ECI4 717 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 ARHGAP22Q7Z5H3 698 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 CLEC14AQ86T13 490 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 TMEM135Q86UB9 458 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 PDIK1LQ8N165 341 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 SPATA4Q8NEY3 305 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 OR4E2Q8NGC2 313 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 SKA2Q8WVK7 121 aaPredicted RBP13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 ASZ1Q8WWH4 475 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 LCN9Q8WX39 176 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 ZNF592Q92610 1267 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 ART4Q93070 314 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 SNF8Q96H20 258 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 SIGLEC10Q96LC7 697 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 FCRL3Q96P31 734 aaPredicted RBP13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 TAAR9Q96RI9 348 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 TCF12Q99081 682 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 HGH1Q9BTY7 390 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 CARD6Q9BX69 1037 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 SRMSQ9H3Y6 488 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 MVB12BQ9H7P6 319 aa13.62□□□□□ -0.23
PCDHGC3-208ENST00000622836 HRASLS2Q9NWW9 162 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms