RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 BMP7P18075 431 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 CD72P21854 359 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 ASMTP46597 345 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 SEPHS1P49903 392 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 PGDP52209 483 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 HSPB3Q12988 150 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 SLC9A5Q14940 896 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 ZIK1Q3SY52 487 aaPredicted RBP9.1□□□□□ -0.95
GGA3-223ENST00000621870 RAB6CQ53S08 254 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 PRRT3Q5FWE3 981 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 RBM20Q5T481 1227 aaKnown RBP9.1□□□□□ -0.95
GGA3-223ENST00000621870 SWT1Q5T5J6 900 aaKnown RBP9.1□□□□□ -0.95
GGA3-223ENST00000621870 PIM3Q86V86 326 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 OFCC1Q8IZS5 231 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 ZNF607Q96SK3 696 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 GSDMCQ9BYG8 508 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 RAB6CQ9H0N0 254 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 SLC2A4RGQ9NR83 387 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 OR10H3O60404 316 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 SNUPNO95149 360 aaKnown RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 EDN1P05305 212 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 ATP1B2P14415 290 aaPredicted RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 GRIA2P42262 883 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 PREPP48147 710 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 GJA8P48165 433 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 STXBP1P61764 594 aaKnown RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 HMGCS1Q01581 520 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 HEPACAMQ14CZ8 416 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 EIF4HQ15056 248 aaKnown RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 LPAL2Q16609 132 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 LRRC26Q2I0M4 334 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 VPS26BQ4G0F5 336 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 RALGPS2Q86X27 583 aaPredicted RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 EPHX4Q8IUS5 362 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 ZC3H3Q8IXZ2 948 aaKnown RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 CPSF7Q8N684 471 aaKnown RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 MRPL43Q8N983 215 aaKnown RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 ATP6V1C2Q8NEY4 427 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 OR2T12Q8NG77 320 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 ZNF563Q8TA94 476 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 SLC22A18Q96BI1 424 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 OSBPL10Q9BXB5 764 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 PRRG4Q9BZD6 226 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 SEC14L3Q9UDX4 400 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 AP4S1Q9Y587 144 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 PCDHGA4Q9Y5G9 962 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 U3KQV3 271 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 MYH10P35580 1976 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 SCN9AQ15858 1988 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 SEC16AO15027 2179 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 A0A1W2PQU0 124 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 CXorf49A8MYA2 514 aaPredicted RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 ADAM12O43184 909 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 SERPINA6P08185 405 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 CCNYL3P0C7X3 344 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 LAMP2P13473 410 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 DRD4P21917 467 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 CPN2P22792 545 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 GLDCP23378 1020 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 NDUFS1P28331 727 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 GDF5P43026 501 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 OC90Q02509 493 aaPredicted RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 KLF10Q13118 480 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 COL9A2Q14055 689 aaPredicted RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 SLBPQ14493 270 aaKnown RBP eCLIP9.09□□□□□ -0.95
GGA3-223ENST00000621870 ZNF781Q8N8C0 355 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 FBXO15Q8NCQ5 510 aaPredicted RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 ZNF248Q8NDW4 579 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 REXO5Q96IC2 774 aaKnown RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 C1orf74Q96LT6 269 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 CDK15Q96Q40 435 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 POLR1BQ9H9Y6 1135 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 GALPQ9UBC7 116 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 TAC3Q9UHF0 121 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 SLC22A14Q9Y267 594 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 SAMHD1Q9Y3Z3 626 aaKnown RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 MAP4K5Q9Y4K4 846 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 TTC34A8MYJ7 566 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 ERN1O75460 977 aaKnown RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 UNC5CO95185 931 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 ETV3P41162 512 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 ARCN1P48444 511 aaKnown RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 ZNF805Q5CZA5 627 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 WDR45BQ5MNZ6 344 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 ZFP1Q6P2D0 407 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 ZDHHC24Q6UX98 284 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 ZYG11AQ6WRX3 759 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 AMIGO2Q86SJ2 522 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 UMODL1-AS1Q8N2C9 162 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 TTC29Q8NA56 475 aaPredicted RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 VANGL1Q8TAA9 524 aaPredicted RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 DNASE1L2Q92874 299 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 MRPL48Q96GC5 212 aaKnown RBP9.09□□□□□ -0.95
GGA3-223ENST00000621870 VPS35Q96QK1 796 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 HERC2P3Q9BVR0 1158 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 PCBD2Q9H0N5 130 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 NCDNQ9UBB6 729 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 PPM1HQ9ULR3 514 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 HEBP2Q9Y5Z4 205 aa9.09□□□□□ -0.95
GGA3-223ENST00000621870 M0QZQ0 153 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms