RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ALDH4A1P30038 563 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 ABCG1P45844 678 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 GPR3P46089 330 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 CLCN7P51798 805 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 E2F1Q01094 437 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 FOXC1Q12948 553 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 GPR18Q14330 331 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 GBX1Q14549 363 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 C3orf62Q6ZUJ4 267 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 CYS1Q717R9 158 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 TMPRSS7Q7RTY8 843 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 PDZD3Q86UT5 571 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 C12orf66Q96MD2 445 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 PANX3Q96QZ0 392 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 FMO2Q99518 471 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 LRRN3Q9H3W5 708 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 PPANQ9NQ55 473 aaKnown RBP13.98□□□□□ -0.17
CBWD3-217ENST00000621474 LATS2Q9NRM7 1088 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 IMP3Q9NV31 184 aaKnown RBP13.98□□□□□ -0.17
CBWD3-217ENST00000621474 FRYQ5TBA9 3013 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 ZFHX4Q86UP3 3567 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 FAM149AA5PLN7 773 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 LILRA5A6NI73 299 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 PFDN6O15212 129 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 SLCO2B1O94956 709 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 VIPP01282 170 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 CD1CP29017 333 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 CSF2RBP32927 897 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 HALP42357 657 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 CD151P48509 253 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 CSE1LP55060 971 aaKnown RBP13.97□□□□□ -0.17
CBWD3-217ENST00000621474 MGAT5Q09328 741 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 HSPA14Q0VDF9 509 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 CUL1Q13616 776 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 RBM20Q5T481 1227 aaKnown RBP13.97□□□□□ -0.17
CBWD3-217ENST00000621474 TMEM26Q6ZUK4 368 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 PALM2Q8IXS6 379 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 SLC22A15Q8IZD6 547 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 KCNJ9Q92806 393 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 TMEM159Q96B96 161 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 CXorf40BQ96DE9 158 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 NDNQ99608 321 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 AARSD1Q9BTE6 412 aaKnown RBP13.97□□□□□ -0.17
CBWD3-217ENST00000621474 SCNM1Q9BWG6 230 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 TBC1D10AQ9BXI6 508 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 UCK1Q9HA47 277 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 RDH14Q9HBH5 336 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 OGFRQ9NZT2 677 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 ZFATQ9P243 1243 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 KLK13Q9UKR3 277 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 ATXN7L1Q9ULK2 861 aaPredicted RBP13.97□□□□□ -0.17
CBWD3-217ENST00000621474 NFU1Q9UMS0 254 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 LAMA5O15230 3695 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 FAM221BA6H8Z2 402 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 FAM159BA6NKW6 160 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 D6RAR5 112 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 MYBL2P10244 700 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 TEX35Q5T0J7 233 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 NKAIN2Q5VXU1 208 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 ZNF449Q6P9G9 518 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 B3GNT8Q7Z7M8 397 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 DCBLD1Q8N8Z6 715 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 AVL9Q8NBF6 648 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 ASZ1Q8WWH4 475 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 SLC38A3Q99624 504 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 NRTNQ99748 197 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 TSSK1BQ9BXA7 367 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 ABCG4Q9H172 646 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 CDC42EP4Q9H3Q1 356 aaKnown RBP13.97□□□□□ -0.17
CBWD3-217ENST00000621474 KCNK4Q9NYG8 393 aa13.97□□□□□ -0.17
CBWD3-217ENST00000621474 F8W8V4 182 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 H3BMM5 538 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 SNRNP200O75643 2136 aaKnown RBP13.96□□□□□ -0.17
CBWD3-217ENST00000621474 TCEA3O75764 348 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 MT-CO3P00414 261 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 GSTA2P09210 222 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 PGGT1BP53609 377 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 EPHA4P54764 986 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 PLOD1Q02809 727 aaPredicted RBP13.96□□□□□ -0.17
CBWD3-217ENST00000621474 SQSTM1Q13501 440 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 KYNUQ16719 465 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 AMZ1Q400G9 498 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 SYTL3Q4VX76 610 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 ZNF574Q6ZN55 896 aaPredicted RBP13.96□□□□□ -0.17
CBWD3-217ENST00000621474 OTOAQ7RTW8 1153 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 ZC3HC1Q86WB0 502 aaKnown RBP13.96□□□□□ -0.17
CBWD3-217ENST00000621474 TMPRSS12Q86WS5 348 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 TRIM48Q8IWZ4 208 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 IFT20Q8IY31 132 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 SIDT2Q8NBJ9 832 aaKnown RBP13.96□□□□□ -0.17
CBWD3-217ENST00000621474 PHC3Q8NDX5 983 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 ACVR1CQ8NER5 493 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 CD200R1Q8TD46 325 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 JPH3Q8WXH2 748 aaPredicted RBP13.96□□□□□ -0.17
CBWD3-217ENST00000621474 TFGQ92734 400 aaPredicted RBP13.96□□□□□ -0.17
CBWD3-217ENST00000621474 NUDT22Q9BRQ3 303 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 STN1Q9H668 368 aaKnown RBP13.96□□□□□ -0.17
CBWD3-217ENST00000621474 KIR3DX1Q9H7L2 352 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 ANKZF1Q9H8Y5 726 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 NINJ2Q9NZG7 142 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms