RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 CBFA2T3O75081 653 aa13.33□□□□□ -0.27
NEK3-210ENST00000620675 SPRP35270 261 aaPredicted RBP13.33□□□□□ -0.27
NEK3-210ENST00000620675 MSH2P43246 934 aa13.33□□□□□ -0.27
NEK3-210ENST00000620675 NAB1Q13506 487 aa13.33□□□□□ -0.27
NEK3-210ENST00000620675 KLHL38Q2WGJ6 581 aa13.33□□□□□ -0.27
NEK3-210ENST00000620675 SYTL3Q4VX76 610 aa13.33□□□□□ -0.27
NEK3-210ENST00000620675 SFRP1Q8N474 314 aa13.33□□□□□ -0.27
NEK3-210ENST00000620675 GPR156Q8NFN8 814 aa13.33□□□□□ -0.27
NEK3-210ENST00000620675 RHBDD1Q8TEB9 315 aa13.33□□□□□ -0.27
NEK3-210ENST00000620675 EEF1AKMT1Q8WVE0 214 aa13.33□□□□□ -0.27
NEK3-210ENST00000620675 JPH3Q8WXH2 748 aaPredicted RBP13.33□□□□□ -0.27
NEK3-210ENST00000620675 LATS2Q9NRM7 1088 aa13.33□□□□□ -0.27
NEK3-210ENST00000620675 PCOLCE2Q9UKZ9 415 aa13.33□□□□□ -0.27
NEK3-210ENST00000620675 PCDHGB2Q9Y5G2 931 aa13.33□□□□□ -0.27
NEK3-210ENST00000620675 H3BMM5 538 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 TPP1O14773 563 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 LIN7AO14910 233 aaPredicted RBP13.33□□□□□ -0.28
NEK3-210ENST00000620675 VPS26AO75436 327 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 SLCO2B1O94956 709 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 TSPAN12O95859 305 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 ALDOAP04075 364 aaKnown RBP13.33□□□□□ -0.28
NEK3-210ENST00000620675 TUBBP07437 444 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 INHBAP08476 426 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 VCLP18206 1134 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 ACADLP28330 430 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 GRK6P43250 576 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 ABRQ12979 859 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 USP10Q14694 798 aaKnown RBP13.33□□□□□ -0.28
NEK3-210ENST00000620675 RPE65Q16518 533 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 PROX2Q3B8N5 592 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 PPM1JQ5JR12 505 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 CAPRIN2Q6IMN6 1127 aaKnown RBP13.33□□□□□ -0.28
NEK3-210ENST00000620675 FAM45BPQ6NSW5 357 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 FBXO38Q6PIJ6 1188 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 OGFOD3Q6PK18 319 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 ABRAXAS1Q6UWZ7 409 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 PIWIL4Q7Z3Z4 852 aaKnown RBP13.33□□□□□ -0.28
NEK3-210ENST00000620675 C17orf82Q86X59 251 aaPredicted RBP13.33□□□□□ -0.28
NEK3-210ENST00000620675 SLC22A15Q8IZD6 547 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 CYP4X1Q8N118 509 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 ARL14Q8N4G2 192 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 FAM45AQ8TCE6 357 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 ASZ1Q8WWH4 475 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 TMEM159Q96B96 161 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 C12orf66Q96MD2 445 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 IMP3Q9NV31 184 aaKnown RBP13.33□□□□□ -0.28
NEK3-210ENST00000620675 TAS2R13Q9NYV9 303 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 TRMT6Q9UJA5 497 aaKnown RBP13.33□□□□□ -0.28
NEK3-210ENST00000620675 PLAAQ9Y263 795 aa13.33□□□□□ -0.28
NEK3-210ENST00000620675 COL27A1Q8IZC6 1860 aaPredicted RBP13.32□□□□□ -0.28
NEK3-210ENST00000620675 HEATR5BQ9P2D3 2071 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 PPM1DO15297 605 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 FLRT2O43155 660 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 WISP3O95389 354 aaPredicted RBP13.32□□□□□ -0.28
NEK3-210ENST00000620675 TOP3BO95985 862 aaKnown RBP13.32□□□□□ -0.28
NEK3-210ENST00000620675 APOA4P06727 396 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 PLA2G5P39877 138 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 SLC14A1Q13336 389 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 CCSMST1Q4G0I0 132 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 ZCCHC8Q6NZY4 707 aaKnown RBP13.32□□□□□ -0.28
NEK3-210ENST00000620675 GUSBP11Q6P575 273 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 LVRNQ6Q4G3 990 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 ADGRD1Q6QNK2 874 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 CYHR1Q6ZMK1 362 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 PIP4P1Q86T03 277 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 LMNTD1Q8N9Z9 388 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 CFAP61Q8NHU2 1237 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 BAHD1Q8TBE0 780 aaPredicted RBP13.32□□□□□ -0.28
NEK3-210ENST00000620675 EURLQ9NYK6 297 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 ACSL5Q9ULC5 683 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 COMMD10Q9Y6G5 202 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 AKAP13Q12802 2813 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 SPTBP11277 2137 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 TM4SF5O14894 197 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 GIPC1O14908 333 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 NUDT17P0C025 328 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 SLC35G4P0C7Q5 338 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 H2AFXP16104 143 aaPredicted RBP13.32□□□□□ -0.28
NEK3-210ENST00000620675 IRF9Q00978 393 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 SUZ12Q15022 739 aaKnown RBP13.32□□□□□ -0.28
NEK3-210ENST00000620675 ZKSCAN8Q15776 578 aaPredicted RBP13.32□□□□□ -0.28
NEK3-210ENST00000620675 PERM1Q5SV97 790 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 PLEKHS1Q5SXH7 462 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 AGAP9Q5VTM2 703 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 WASH2PQ6VEQ5 465 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 PDZD3Q86UT5 571 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 SDR16C5Q8N3Y7 309 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 DEFB124Q8NES8 71 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 OR5AR1Q8NGP9 310 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 INPP5DQ92835 1189 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 GLMNQ92990 594 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 FAM122AQ96E09 287 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 WASH6PQ9NQA3 447 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 CORO1CQ9ULV4 474 aaPredicted RBP13.32□□□□□ -0.28
NEK3-210ENST00000620675 RNF215Q9Y6U7 377 aa13.32□□□□□ -0.28
NEK3-210ENST00000620675 TRIM49D1C9J1S8 452 aa13.31□□□□□ -0.28
NEK3-210ENST00000620675 KCNJ13O60928 360 aa13.31□□□□□ -0.28
NEK3-210ENST00000620675 ZNF37AP17032 561 aaPredicted RBP13.31□□□□□ -0.28
NEK3-210ENST00000620675 CSRP3P50461 194 aa13.31□□□□□ -0.28
NEK3-210ENST00000620675 UBE2IP63279 158 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms