RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 TRIM74Q86UV6 250 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 SIAH3Q8IW03 269 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 KBTBD2Q8IY47 623 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 ATPAF2Q8N5M1 289 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 OR2L2Q8NH16 312 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 HEXDCQ8WVB3 486 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 SCAMP4Q969E2 229 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 ADGRE3Q9BY15 652 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 MVB12BQ9H7P6 319 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 PCDH9Q9HC56 1237 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 LUZP4Q9P127 313 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 LCMT1Q9UIC8 334 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 SIK3Q9Y2K2 1263 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 MRPS2Q9Y399 296 aaKnown RBP4.43□□□□□ -1.7
SNCA-213ENST00000618500 HIVEP3Q5T1R4 2406 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 MED13LQ71F56 2210 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 GSAPA4D1B5 854 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 C2orf74A8MZ97 194 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 TMEM150CB9EJG8 249 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 BHMG1C9JSJ3 638 aaPredicted RBP4.42□□□□□ -1.7
SNCA-213ENST00000618500 DSCR3O14972 297 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 CNOT3O75175 753 aaKnown RBP4.42□□□□□ -1.7
SNCA-213ENST00000618500 KLK2P20151 261 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 ITGAXP20702 1163 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 OTX2P32243 289 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 SOX5P35711 763 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 USP8P40818 1118 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 NSFP46459 744 aaKnown RBP4.42□□□□□ -1.7
SNCA-213ENST00000618500 CDO1Q16878 200 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 DNAJC24Q6P3W2 148 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 ADGRD1Q6QNK2 874 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 ARHGAP36Q6ZRI8 547 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 RFLNAQ6ZTI6 216 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 DNAJC22Q8N4W6 341 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 POGLUT1Q8NBL1 392 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 CPA5Q8WXQ8 436 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 CSPG4P5Q96PW8 444 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 TAAR6Q96RI8 345 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 SYT11Q9BT88 431 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 SNRNP25Q9BV90 132 aaKnown RBP4.42□□□□□ -1.7
SNCA-213ENST00000618500 OR2AG1Q9H205 316 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 PDCL3Q9H2J4 239 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 TRIM45Q9H8W5 580 aaPredicted RBP4.42□□□□□ -1.7
SNCA-213ENST00000618500 ZWILCHQ9H900 591 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 PRM3Q9NNZ6 103 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 NLRC4Q9NPP4 1024 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 ITGB1BP2Q9UKP3 347 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 MYO6Q9UM54 1294 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 HIVEP1P15822 2718 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 A6NL46 340 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 AGRPO00253 132 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 ZNF749O43361 778 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 SNX2O60749 519 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 RASAL1O95294 804 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 SERPINA7P05543 415 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 MMP2P08253 660 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 UCHL3P15374 230 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 UGT1A4P22310 534 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 PPP1CAP62136 330 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 PPP2R2AP63151 447 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 FANCCQ00597 558 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 FOXD4Q12950 439 aaPredicted RBP4.42□□□□□ -1.7
SNCA-213ENST00000618500 PRKD1Q15139 912 aaPredicted RBP4.42□□□□□ -1.7
SNCA-213ENST00000618500 ABHD17BQ5VST6 288 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 CES4AQ5XG92 561 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 SARM1Q6SZW1 724 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 TMCO3Q6UWJ1 677 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 MEX3BQ6ZN04 569 aaKnown RBP4.42□□□□□ -1.7
SNCA-213ENST00000618500 CDHR3Q6ZTQ4 885 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 MARK2Q7KZI7 788 aaKnown RBP4.42□□□□□ -1.7
SNCA-213ENST00000618500 COX15Q7KZN9 410 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 POLNQ7Z5Q5 900 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 AMZ2Q86W34 360 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 C19orf47Q8N9M1 422 aaKnown RBP4.42□□□□□ -1.7
SNCA-213ENST00000618500 FLVCR1-AS1Q8TAF5 88 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 FAF2Q96CS3 445 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 PEBP4Q96S96 227 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 OLFM1Q99784 485 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 MAGEB5Q9BZ81 275 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 ZNF700Q9H0M5 742 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 ADAM22Q9P0K1 906 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 CD84Q9UIB8 345 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 WDR37Q9Y2I8 494 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 PTRH2Q9Y3E5 179 aaKnown RBP4.42□□□□□ -1.7
SNCA-213ENST00000618500 FHOD1Q9Y613 1164 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 HS3ST3B1Q9Y662 390 aa4.42□□□□□ -1.7
SNCA-213ENST00000618500 COL12A1Q99715 3063 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 TRBV23OR9-2A0A075B6M9 112 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 MGAT4DA6NG13 374 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 ANKRD66B4E2M5 251 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 DFFAO00273 331 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 KLK8O60259 260 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 SLC19A2O60779 497 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 CLDN7O95471 211 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 MST1P26927 711 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 ARSEP51690 589 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 KCNK10P57789 538 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 CSNK1G2P78368 415 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 PRKAA1Q13131 559 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 SLC9A5Q14940 896 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms