RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 FASTKD1Q53R41 847 aaKnown RBP15.62■□□□□ 0.09
BRCA1-228ENST00000618469 CCDC81Q6ZN84 652 aa15.62■□□□□ 0.09
BRCA1-228ENST00000618469 PLXDC1Q8IUK5 500 aa15.62■□□□□ 0.09
BRCA1-228ENST00000618469 CPT1BQ92523 772 aa15.62■□□□□ 0.09
BRCA1-228ENST00000618469 TGM7Q96PF1 710 aa15.62■□□□□ 0.09
BRCA1-228ENST00000618469 INSM2Q96T92 566 aaPredicted RBP15.62■□□□□ 0.09
BRCA1-228ENST00000618469 NAPGQ99747 312 aaPredicted RBP15.62■□□□□ 0.09
BRCA1-228ENST00000618469 DPH1Q9BZG8 443 aa15.62■□□□□ 0.09
BRCA1-228ENST00000618469 FAM117AQ9C073 453 aa15.62■□□□□ 0.09
BRCA1-228ENST00000618469 DDX47Q9H0S4 455 aaKnown RBP15.62■□□□□ 0.09
BRCA1-228ENST00000618469 CATSPERZQ9NTU4 200 aa15.62■□□□□ 0.09
BRCA1-228ENST00000618469 FOXJ2Q9P0K8 574 aa15.62■□□□□ 0.09
BRCA1-228ENST00000618469 PDP2Q9P2J9 529 aa15.62■□□□□ 0.09
BRCA1-228ENST00000618469 IL17BQ9UHF5 180 aa15.62■□□□□ 0.09
BRCA1-228ENST00000618469 HEMK1Q9Y5R4 338 aaPredicted RBP15.62■□□□□ 0.09
BRCA1-228ENST00000618469 C17orf113A0A1B0GUU1 675 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 EFCAB7A8K855 629 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 K7ENP7 123 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 QSOX1O00391 747 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 OR1I1O60431 355 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 FTH1P02794 183 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 NMBRP28336 390 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 PREPP48147 710 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 CSRP3P50461 194 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 SRSF6Q13247 344 aaKnown RBP15.61■□□□□ 0.09
BRCA1-228ENST00000618469 PPP1R7Q15435 360 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 AARS2Q5JTZ9 985 aaKnown RBP15.61■□□□□ 0.09
BRCA1-228ENST00000618469 COLEC12Q5KU26 742 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 LYPLAL1Q5VWZ2 237 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 INO80CQ6PI98 192 aaPredicted RBP15.61■□□□□ 0.09
BRCA1-228ENST00000618469 CERS6Q6ZMG9 384 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 OTUD6BQ8N6M0 293 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 USP7Q93009 1102 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 PMEPA1Q969W9 287 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 TTC1Q99614 292 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 TREX1Q9NSU2 369 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 NEU2Q9Y3R4 380 aa15.61■□□□□ 0.09
BRCA1-228ENST00000618469 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.61■□□□□ 0.09
BRCA1-228ENST00000618469 C9orf172C9J069 976 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 GOLGA8MH3BSY2 632 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 NVLO15381 856 aaKnown RBP15.6■□□□□ 0.09
BRCA1-228ENST00000618469 CAPN5O15484 640 aaPredicted RBP15.6■□□□□ 0.09
BRCA1-228ENST00000618469 AVILO75366 819 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 RASSF9O75901 435 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 GSTM1P09488 218 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 OR56A5P0C7T3 313 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 FGF3P11487 239 aaPredicted RBP15.6■□□□□ 0.09
BRCA1-228ENST00000618469 LEPRP48357 1165 aaKnown RBP15.6■□□□□ 0.09
BRCA1-228ENST00000618469 GSTM4Q03013 218 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 BOP1Q14137 746 aaKnown RBP15.6■□□□□ 0.09
BRCA1-228ENST00000618469 ZNF658BQ4V348 819 aaPredicted RBP15.6■□□□□ 0.09
BRCA1-228ENST00000618469 SYTL3Q4VX76 610 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 TMEM164Q5U3C3 297 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 CAPRIN2Q6IMN6 1127 aaKnown RBP15.6■□□□□ 0.09
BRCA1-228ENST00000618469 IRGCQ6NXR0 463 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 CASC4Q6P4E1 433 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 CES3Q6UWW8 571 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 LDB1Q86U70 411 aaPredicted RBP15.6■□□□□ 0.09
BRCA1-228ENST00000618469 ELMO1Q92556 727 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 ART4Q93070 314 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 MFSD3Q96ES6 412 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 KIFC1Q9BW19 673 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 OR52A5Q9H2C5 316 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 MRM3Q9HC36 420 aaKnown RBP15.6■□□□□ 0.09
BRCA1-228ENST00000618469 OCIAD1Q9NX40 245 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.6■□□□□ 0.09
BRCA1-228ENST00000618469 MARCH4Q9P2E8 410 aaPredicted RBP15.6■□□□□ 0.09
BRCA1-228ENST00000618469 ANAPC5Q9UJX4 755 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 SOX13Q9UN79 622 aa15.6■□□□□ 0.09
BRCA1-228ENST00000618469 PTPN13Q12923 2485 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 IFRD1O00458 451 aaPredicted RBP15.59■□□□□ 0.09
BRCA1-228ENST00000618469 C9P02748 559 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 ANKRD34CP0C6C1 535 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 PPARGP37231 505 aaPredicted RBP15.59■□□□□ 0.09
BRCA1-228ENST00000618469 PPP1CAP62136 330 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 CLN3Q13286 438 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 KRT33BQ14525 404 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 PAPD7Q5XG87 772 aaKnown RBP15.59■□□□□ 0.09
BRCA1-228ENST00000618469 ZNF449Q6P9G9 518 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 FAM92BQ6ZTR7 304 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 ARHGAP22Q7Z5H3 698 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 CAND1Q86VP6 1230 aaKnown RBP15.59■□□□□ 0.09
BRCA1-228ENST00000618469 MPP5Q8N3R9 675 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 SNRNP27Q8WVK2 155 aaKnown RBP15.59■□□□□ 0.09
BRCA1-228ENST00000618469 SGSM3Q96HU1 749 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 C9orf72Q96LT7 481 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 SERPINB12Q96P63 405 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 KIR3DX1Q9H7L2 352 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 XAB2Q9HCS7 855 aaKnown RBP15.59■□□□□ 0.09
BRCA1-228ENST00000618469 SLC39A1Q9NY26 324 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 SAMD15Q9P1V8 674 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 ASIC3Q9UHC3 531 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 SLC24A2Q9UI40 661 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 ACSL6Q9UKU0 697 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 HEBP2Q9Y5Z4 205 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 SAR1BQ9Y6B6 198 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 BOD1L1Q8NFC6 3051 aa15.59■□□□□ 0.09
BRCA1-228ENST00000618469 CTAGE9A4FU28 777 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 B4E171 279 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 F8W8V4 182 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms