RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 MTCH2Q9Y6C9 303 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 GABREP78334 506 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 SOX4Q06945 474 aaPredicted RBP10.74□□□□□ -0.69
POLR2A-209ENST00000617998 CNGA3Q16281 694 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 HNRNPA1L2Q32P51 320 aaKnown RBP10.74□□□□□ -0.69
POLR2A-209ENST00000617998 RAB11FIP2Q7L804 512 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 PYROXD2Q8N2H3 581 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 OR52K2Q8NGK3 314 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 LENG8Q96PV6 779 aaPredicted RBP10.74□□□□□ -0.69
POLR2A-209ENST00000617998 PRTFDC1Q9NRG1 225 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 NHSQ6T4R5 1651 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 CYP11A1P05108 521 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 RING1Q06587 406 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 FAM69BQ5VUD6 431 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 SEL1L3Q68CR1 1132 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 DNAJC14Q6Y2X3 702 aaPredicted RBP10.74□□□□□ -0.69
POLR2A-209ENST00000617998 SLC13A3Q8WWT9 602 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 PNPLA2Q96AD5 504 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 YIPF4Q9BSR8 244 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 TMEM120AQ9BXJ8 343 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 STK16O75716 305 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 SMNDC1O75940 238 aaKnown RBP eCLIP10.74□□□□□ -0.693e-7■■■■□ 19.3
POLR2A-209ENST00000617998 PAICSP22234 425 aaKnown RBP10.74□□□□□ -0.69
POLR2A-209ENST00000617998 PTGER3P43115 390 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 FCHO2Q0JRZ9 810 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 TMEM115Q12893 351 aaPredicted RBP10.74□□□□□ -0.69
POLR2A-209ENST00000617998 CTBP1Q13363 440 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 LARS2Q15031 903 aaKnown RBP10.74□□□□□ -0.69
POLR2A-209ENST00000617998 DCUN1D3Q8IWE4 304 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 PADI1Q9ULC6 663 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 PLCL2Q9UPR0 1127 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 SNED1Q8TER0 1413 aa10.74□□□□□ -0.69
POLR2A-209ENST00000617998 NPEPPSL1A6NEC2 478 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 ERI3O43414 337 aaKnown RBP10.73□□□□□ -0.69
POLR2A-209ENST00000617998 SEC24AO95486 1093 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 ETV3P41162 512 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 MAGOHP61326 146 aaKnown RBP10.73□□□□□ -0.69
POLR2A-209ENST00000617998 PRR5P85299 388 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 HSF2Q03933 536 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 TMPPEQ6ZT21 453 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 RBM12BQ8IXT5 1001 aaKnown RBP10.73□□□□□ -0.69
POLR2A-209ENST00000617998 SPATA4Q8NEY3 305 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 FAM81AQ8TBF8 368 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 AIM2O14862 343 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 ALDOAP04075 364 aaKnown RBP10.73□□□□□ -0.69
POLR2A-209ENST00000617998 GNAZP19086 355 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 C2orf80Q0P641 193 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 MRPL49Q13405 166 aaKnown RBP10.73□□□□□ -0.69
POLR2A-209ENST00000617998 PUM1Q14671 1186 aaKnown RBP eCLIP10.73□□□□□ -0.697e-7■■■□□ 15.3
POLR2A-209ENST00000617998 TOR1AIP1Q5JTV8 583 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 PCDHGA2Q9Y5H1 932 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 SLCO1B7G3V0H7 640 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 TMCC2O75069 709 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 RETP07949 1114 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 CCDC159P0C7I6 412 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 DGKQP52824 942 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 EPHA4P54764 986 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 ZNF423Q2M1K9 1284 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 TOR1AIP2Q8NFQ8 470 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 ZMAT2Q96NC0 199 aaKnown RBP10.73□□□□□ -0.69
POLR2A-209ENST00000617998 ADAP2Q9NPF8 381 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 MED4Q9NPJ6 270 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 SOX13Q9UN79 622 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 TRGV8A0A0C4DH27 118 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 HCRTO43612 131 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 GYPCP04921 128 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 TPP2P29144 1249 aaPredicted RBP10.73□□□□□ -0.69
POLR2A-209ENST00000617998 FMO1Q01740 532 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 ATG14Q6ZNE5 492 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 NETO1Q8TDF5 533 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 TACO1Q9BSH4 297 aaKnown RBP10.73□□□□□ -0.69
POLR2A-209ENST00000617998 HHATLQ9HCP6 504 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 A0A0G2JN53 185 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 TMEM189-UBE2V1I3L0A0 370 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 SERPINB7O75635 380 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 CREB1P16220 341 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 CD70P32970 193 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 EMP2P54851 167 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 LRIT3Q3SXY7 679 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 ANXA8L1Q5VT79 327 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 NLGN4XQ8N0W4 816 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 VWA7Q9Y334 891 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 NID2Q14112 1375 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 NSG1A0A0A6YYJ2 146 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 SCDO00767 359 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 SOCS5O75159 536 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 NR1D1P20393 614 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 HOXC13P31276 330 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 GTF2IRD2BQ6EKJ0 949 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 GPRIN3Q6ZVF9 776 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 GTF2IRD2Q86UP8 949 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 UBQLNLQ8IYU4 475 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 TSEN2Q8NCE0 465 aaKnown RBP10.73□□□□□ -0.69
POLR2A-209ENST00000617998 WRAP73Q9P2S5 460 aaPredicted RBP10.73□□□□□ -0.69
POLR2A-209ENST00000617998 BAIAP2L1Q9UHR4 511 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 ACTL7BQ9Y614 415 aa10.73□□□□□ -0.69
POLR2A-209ENST00000617998 PRKD1Q15139 912 aaPredicted RBP10.72□□□□□ -0.69
POLR2A-209ENST00000617998 DECR1Q16698 335 aa10.72□□□□□ -0.69
POLR2A-209ENST00000617998 AMIGO1Q86WK6 493 aa10.72□□□□□ -0.69
POLR2A-209ENST00000617998 PAQR7Q86WK9 346 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms