RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 AP1G1O43747 822 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 CPNE3O75131 537 aaKnown RBP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 RNASEH2AO75792 299 aaKnown RBP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 LGALS2P05162 132 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 GSTM3P21266 225 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 BDNFP23560 247 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 GUCA1AP43080 201 aaPredicted RBP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 SPRED3Q2MJR0 410 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 HJURPQ8NCD3 748 aaPredicted RBP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 SETD6Q8TBK2 473 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 C14orf105Q9NVL8 296 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 MCUBQ9NWR8 336 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 TBC1D14Q9P2M4 693 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 EIF3KQ9UBQ5 218 aaKnown RBP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 MAFBQ9Y5Q3 323 aaPredicted RBP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 NRCAMQ92823 1304 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 STX16-NPEPL1H3BU86 382 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 STX16O14662 325 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 CST3P01034 146 aaPredicted RBP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 HPGDP15428 266 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 VARSP26640 1264 aaKnown RBP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 EPHB3P54753 998 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 TAS2R41P59536 307 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 DCDC1P59894 354 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 SMARCB1Q12824 385 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 CPSF6Q16630 551 aaKnown RBP eCLIP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 NDUFA9Q16795 377 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 OR10G2Q8NGC3 310 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 BRSK1Q8TDC3 778 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 FCRL2Q96LA5 508 aaPredicted RBP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 POLR2J2Q9GZM3 115 aaKnown RBP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 ABCB9Q9NP78 766 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 FBXW11Q9UKB1 542 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 TIMM22Q9Y584 194 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 CEPT1Q9Y6K0 416 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 GADD45GO95257 159 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 MTHFD1P11586 935 aaKnown RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 IVDP26440 423 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 MAZP56270 477 aaKnown RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 SNRPD1P62314 119 aaKnown RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 IRF9Q00978 393 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 PAFAH1B3Q15102 231 aaKnown RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 ATP13A5Q4VNC0 1218 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 ALFQ53S48 1182 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 TMEM198Q66K66 360 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 MON1AQ86VX9 555 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 TMEM192Q8IY95 271 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 CCDC107Q8WV48 283 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 ELMO1Q92556 727 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 SPATA9Q9BWV2 254 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 TPK1Q9H3S4 243 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 AGO1Q9UL18 857 aaKnown RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 GTF2A1LQ9UNN4 478 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 TRPV2Q9Y5S1 764 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 ATRNL1Q5VV63 1379 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 PRPS1L1P21108 318 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 AZGP1P25311 298 aaKnown RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 STT3AP46977 705 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 GALNT1Q10472 559 aaPredicted RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 DNASE1L3Q13609 305 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 CRTC2Q53ET0 693 aaPredicted RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 SH3PXD2AQ5TCZ1 1133 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 ESRP1Q6NXG1 681 aaKnown RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 DCDC5Q6ZRR9 648 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 AKAP1Q92667 903 aaKnown RBP eCLIP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 FBXL20Q96IG2 436 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 CD93Q9NPY3 652 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 DNMT3LQ9UJW3 386 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 ST14Q9Y5Y6 855 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 CAPN14A8MX76 684 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 ZNF879B4DU55 563 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 AMHP03971 560 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 C8GP07360 202 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 TAL1P17542 331 aaPredicted RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 ATP5C1P36542 298 aaKnown RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 RHAGQ02094 409 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 LINC00299Q6ZSB3 139 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 ELMOD2Q8IZ81 293 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 BTN2A3PQ96KV6 586 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 CAMK1GQ96NX5 476 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 TCF25Q9BQ70 676 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 MGME1Q9BQP7 344 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 PCP4L1A6NKN8 68 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 PAGE1O75459 146 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 PAPSS2O95340 614 aaPredicted RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 RBM34P42696 430 aaKnown RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 EMX2Q04743 252 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 MTAPQ13126 283 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 KCTD19Q17RG1 926 aaPredicted RBP10.11□□□□□ -0.79
CUL4A-212ENST00000617546 TBRG1Q3YBR2 411 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 ZNF697Q5TEC3 545 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 NCBP2-AS2Q69YL0 99 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 PTF1AQ7RTS3 328 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 OTOP3Q7RTS5 596 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 KRT77Q7Z794 578 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 TMEM199Q8N511 208 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 OXR1Q8N573 874 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 NRG4Q8WWG1 115 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 ZNF597Q96LX8 424 aa10.11□□□□□ -0.79
CUL4A-212ENST00000617546 C12orf66Q96MD2 445 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms