RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 ELMO2Q96JJ3 720 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 RNF157Q96PX1 679 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 TMUB1Q9BVT8 246 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 TDRD1Q9BXT4 1180 aaKnown RBP8.42□□□□□ -1.06
GPC6-202ENST00000617456 ULBP3Q9BZM4 244 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 OCEL1Q9H607 264 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 NT5MQ9NPB1 228 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 FBXO8Q9NRD0 319 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 ABHD10Q9NUJ1 306 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 RBM22Q9NW64 420 aaKnown RBP eCLIP8.42□□□□□ -1.06
GPC6-202ENST00000617456 GALNT8Q9NY28 637 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 DDX56Q9NY93 547 aaKnown RBP8.42□□□□□ -1.06
GPC6-202ENST00000617456 DTLQ9NZJ0 730 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 PDP2Q9P2J9 529 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 NFKBIL1Q9UBC1 381 aaPredicted RBP8.42□□□□□ -1.06
GPC6-202ENST00000617456 TLK1Q9UKI8 766 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 TTC7AQ9ULT0 858 aaPredicted RBP8.42□□□□□ -1.06
GPC6-202ENST00000617456 POLHQ9Y253 713 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 EFR3BQ9Y2G0 817 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 PRKAB1Q9Y478 270 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 TMEM184BQ9Y519 407 aaPredicted RBP8.42□□□□□ -1.06
GPC6-202ENST00000617456 ABCA12Q86UK0 2595 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 PRRC2CQ9Y520 2896 aaKnown RBP8.41□□□□□ -1.06
GPC6-202ENST00000617456 EFCAB8A8MWE9 144 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 ZSCAN12O43309 604 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 MFSD11O43934 449 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 SNX2O60749 519 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 ZNF254O75437 659 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 DNAJB5O75953 348 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 ASMTLO95671 621 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 PRLP01236 227 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 EPOP01588 193 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 PDGFAP04085 211 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 TUBBP07437 444 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 PDHA1P08559 390 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 CD48P09326 243 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 CTPS1P17812 591 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 LHCGRP22888 699 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 COL8A1P27658 744 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 FASLGP48023 281 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 CLCNKAP51800 687 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 STC1P52823 247 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 EPHB1P54762 984 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 ITKQ08881 620 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 DMPKQ09013 629 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 MMRN1Q13201 1228 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 PYCR3Q53H96 274 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.41□□□□□ -1.06
GPC6-202ENST00000617456 LRRC66Q68CR7 880 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 WDR74Q6RFH5 385 aaPredicted RBP8.41□□□□□ -1.06
GPC6-202ENST00000617456 C6orf15Q6UXA7 325 aaPredicted RBP8.41□□□□□ -1.06
GPC6-202ENST00000617456 TSPAN33Q86UF1 283 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 GALNT13Q8IUC8 556 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 RHOT1Q8IXI2 618 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 SFRP1Q8N474 314 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 PQLC3Q8N755 202 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 GALNT11Q8NCW6 608 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 SLC35G2Q8TBE7 412 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 AP2M1Q96CW1 435 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 STAMBPL1Q96FJ0 436 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 BTBD6Q96KE9 485 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 MLPHQ9BV36 600 aaPredicted RBP8.41□□□□□ -1.06
GPC6-202ENST00000617456 TWSG1Q9GZX9 223 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 EPB41L1Q9H4G0 881 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 STN1Q9H668 368 aaKnown RBP8.41□□□□□ -1.06
GPC6-202ENST00000617456 NHEJ1Q9H9Q4 299 aaPredicted RBP8.41□□□□□ -1.06
GPC6-202ENST00000617456 PCDH9Q9HC56 1237 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 MAGEE1Q9HCI5 957 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.41□□□□□ -1.06
GPC6-202ENST00000617456 OAS3Q9Y6K5 1087 aaKnown RBP8.41□□□□□ -1.06
GPC6-202ENST00000617456 HIVEP3Q5T1R4 2406 aa8.41□□□□□ -1.06
GPC6-202ENST00000617456 SPENQ96T58 3664 aaKnown RBP8.41□□□□□ -1.06
GPC6-202ENST00000617456 PIPSLA2A3N6 862 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 CCDC151A5D8V7 595 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 C3orf70A6NLC5 250 aaPredicted RBP8.4□□□□□ -1.06
GPC6-202ENST00000617456 OR5K4A6NMS3 321 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 H0YC42 278 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 INPP4BO15327 924 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 MFAP3LO75121 409 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 SASH3O75995 380 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 LCA5LO95447 670 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 SOD1P00441 154 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 LINGO3P0C6S8 592 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 SLC2A4P14672 509 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 SPINT3P49223 89 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 SEPHS1P49903 392 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 TPD52P55327 224 aaPredicted RBP8.4□□□□□ -1.06
GPC6-202ENST00000617456 GFERP55789 205 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 TAS2R40P59535 323 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 DCDC1P59894 354 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 MAXP61244 160 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 DR1Q01658 176 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 HSPA14Q0VDF9 509 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 TFDP2Q14188 446 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 TAZQ16635 292 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 ATP13A4Q4VNC1 1196 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 CRTC2Q53ET0 693 aaPredicted RBP8.4□□□□□ -1.06
GPC6-202ENST00000617456 ZDHHC20Q5W0Z9 365 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 SARM1Q6SZW1 724 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 CHST15Q7LFX5 561 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms