RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 DNAJA1P31689 397 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 ARFIP1P53367 373 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 RAB2AP61019 212 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 FNDC3BQ53EP0 1204 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 TMPRSS11BQ86T26 416 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 RELL1Q8IUW5 271 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 ARRDC4Q8NCT1 418 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 SLC16A10Q8TF71 515 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 IRGQQ8WZA9 623 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 NDRG1Q92597 394 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 ZFP3Q96NJ6 502 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 CPA4Q9UI42 421 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 RAI2Q9Y5P3 530 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 ABHD14A-ACY1A0A1B0GW23 586 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 ISPDA4D126 451 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 LRRC14BA6NHZ5 514 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 E9PAM4 449 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 PDHXO00330 501 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 CELF2O95319 508 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 ESR1P03372 595 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 PBX3P40426 434 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 PITPNAQ00169 270 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 CD83Q01151 205 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 SREBF2Q12772 1141 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 RAPSNQ13702 412 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 FNDC8Q8TC99 324 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 PLEKHO2Q8TD55 490 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 SNX33Q8WV41 574 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 CCDC115Q96NT0 180 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 CGREF1Q99674 301 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 SLC39A3Q9BRY0 314 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 AKTIPQ9H8T0 292 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 GDAP2Q9NXN4 497 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 CKLFQ9UBR5 152 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 TCAF2A6NFQ2 919 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 TYROBPO43914 113 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 DNTTP04053 509 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 SLURP2P0DP57 97 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 ARL2P36404 184 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 RGS8P57771 180 aaPredicted RBP10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 CBLBQ13191 982 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 MAB21L1Q13394 359 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 LSAMPQ13449 338 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 KCNJ11Q14654 390 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 TGFBIQ15582 683 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 TMEM44Q2T9K0 475 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 ZDHHC20Q5W0Z9 365 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 ZNF248Q8NDW4 579 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 KCTD7Q96MP8 289 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 ACAT2Q9BWD1 397 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 IL1RAPQ9NPH3 570 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 TVP23BQ9NYZ1 205 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 IKZF2Q9UKS7 526 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 NEURL4Q96JN8 1562 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 SMIM28A0A1B0GU29 152 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 RIIAD1A6NNX1 92 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 GABRDO14764 452 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 TEX28O15482 410 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 TOP3BO95985 862 aaKnown RBP10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 LAMP2P13473 410 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 ZNF182P17025 639 aaPredicted RBP10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 CD72P21854 359 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 DNASE1L3Q13609 305 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 SDHAF4Q5VUM1 108 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 PRR23CQ6ZRP0 262 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 CPNE9Q8IYJ1 553 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 CXorf40AQ8TE69 158 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 SUSD6Q92537 303 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 UCKL1Q9NWZ5 548 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 NDOR1Q9UHB4 597 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 FZD10Q9ULW2 581 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 LOC100130705A0A1B0GUX0 176 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 SMIM10L2AP0DMW4 78 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 SMIM10L2BP0DMW5 78 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 ACADMP11310 421 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 ARHGDIBP52566 201 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 TMBIM6P55061 237 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 SMAD3P84022 425 aaKnown RBP10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 CHIT1Q13231 466 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 NAE1Q13564 534 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 MOGSQ13724 837 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 TIFABQ6ZNK6 161 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 SPAG16Q8N0X2 631 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 MARVELD2Q8N4S9 558 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 OR10G2Q8NGC3 310 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 PIGXQ8TBF5 258 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 AIF1LQ9BQI0 150 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 NTPCRQ9BSD7 190 aaKnown RBP10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 ATG10Q9H0Y0 220 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 TNKS2Q9H2K2 1166 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 SLC17A6Q9P2U8 582 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 UPB1Q9UBR1 384 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 ZDHHC2Q9UIJ5 367 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 SPIN1Q9Y657 262 aaPredicted RBP10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 DLX3O60479 287 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 HCN1O60741 890 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 IFNA16P05015 189 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 GSTT2BP0CG30 244 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 CSTF2P33240 577 aaKnown RBP eCLIP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms