RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 NCF1CA8MVU1 366 aaPredicted RBP9.16□□□□□ -0.94
COL12A1-211ENST00000615798 SMAD9O15198 467 aaKnown RBP9.16□□□□□ -0.94
COL12A1-211ENST00000615798 NCF1P14598 390 aaPredicted RBP9.16□□□□□ -0.94
COL12A1-211ENST00000615798 PRKCHP24723 683 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 NAE1Q13564 534 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 BTBD8Q5XKL5 378 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 SMURF1Q9HCE7 757 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 CD320Q9NPF0 282 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ACOT9Q9Y305 439 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 MFHAS1Q9Y4C4 1052 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 SETD1AO15047 1707 aaKnown RBP9.16□□□□□ -0.94
COL12A1-211ENST00000615798 A0A0G2JN53 185 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 A0A0J9YVX5 310 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 RIIAD1A6NNX1 92 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 FADS2P1A8MWK0 482 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 TO15178 435 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 DCNP07585 359 aaKnown RBP9.16□□□□□ -0.94
COL12A1-211ENST00000615798 KLK7P49862 253 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 HNRNPFP52597 415 aaKnown RBP9.16□□□□□ -0.94
COL12A1-211ENST00000615798 PET117Q6UWS5 81 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 DCDC5Q6ZRR9 648 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 DENND2DQ9H6A0 471 aaPredicted RBP9.16□□□□□ -0.94
COL12A1-211ENST00000615798 XPNPEP1Q9NQW7 623 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 LRFN1Q9P244 771 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 HTR3EA5X5Y0 456 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ZNF99A8MXY4 864 aaPredicted RBP9.16□□□□□ -0.94
COL12A1-211ENST00000615798 MEN1O00255 615 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 SERPINB7O75635 380 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 CYP1A1P04798 512 aaPredicted RBP9.16□□□□□ -0.94
COL12A1-211ENST00000615798 CSH1P0DML2 217 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 CSH2P0DML3 217 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 MMP13P45452 471 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 MCOLN2Q8IZK6 566 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 RNF149Q8NC42 400 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 OR7D4Q8NG98 312 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ZNF607Q96SK3 696 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 POLHQ9Y253 713 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 CYTIPO60759 359 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ARHGEF15O94989 841 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 CCNB1P14635 433 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 CTSKP43235 329 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 DGKQP52824 942 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 DSTNP60981 165 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 CSNK2A1P68400 391 aaPredicted RBP9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ATF7IP2Q5U623 682 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 TANGO2Q6ICL3 276 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 SVOPLQ8N434 492 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 CSNK2A3Q8NEV1 391 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 MED30Q96HR3 178 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 PNMA5Q96PV4 448 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ACOX2Q99424 681 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 KXD1Q9BQD3 176 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 SUV39H1O43463 412 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 RAB3DO95716 219 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 BMP6P22004 513 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 CCNFP41002 786 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ITPK1Q13572 414 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 SMARCD3Q6STE5 483 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ZNF227Q86WZ6 799 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 IQCKQ8N0W5 287 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ZNF565Q8N9K5 539 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 BTF3L4Q96K17 158 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 CPNE1Q99829 537 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 TMEM9Q9P0T7 183 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 OR10H3O60404 316 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 PDYNP01213 254 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 PPIBP23284 216 aaKnown RBP9.16□□□□□ -0.94
COL12A1-211ENST00000615798 GLRBP48167 497 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 UGT3A2Q3SY77 523 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 TMEM104Q8NE00 496 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ZFP3Q96NJ6 502 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 MAGEL2Q9UJ55 1249 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 PHF24Q9UPV7 400 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 A8MV72 311 aaPredicted RBP9.16□□□□□ -0.94
COL12A1-211ENST00000615798 HHLA1C9JL84 531 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 PMM2O15305 246 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 RAD51DO75771 328 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 GNALP38405 381 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 TRIM61Q5EBN2 209 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ANKRD23Q86SG2 305 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ANKRD53Q8N9V6 530 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 TCP10LQ8TDR4 215 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 SLC44A1Q8WWI5 657 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 CCDC120Q96HB5 630 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 QRFPRQ96P65 431 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ST6GALNAC4Q9H4F1 302 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ERVK-5Q9HDB9 667 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 CPED1A4D0V7 1026 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 RNASEH1O60930 286 aaKnown RBP9.16□□□□□ -0.94
COL12A1-211ENST00000615798 RFPL1O75677 317 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 BEST1O76090 585 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 MAT2AP31153 395 aaKnown RBP9.16□□□□□ -0.94
COL12A1-211ENST00000615798 FUT2Q10981 343 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 KDELC2Q7Z4H8 507 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ZNF248Q8NDW4 579 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 FAM13CQ8NE31 585 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ZNF70Q9UC06 446 aaPredicted RBP9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ATP6AP2A0A1C7CYW4 349 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 CCNYL3P0C7X3 344 aa9.15□□□□□ -0.94
COL12A1-211ENST00000615798 PDX1P52945 283 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms