RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 KCNE2Q9Y6J6 123 aa2.59□□□□□ -1.99
HMGB1P24-202ENST00000615653 DDX49Q9Y6V7 483 aaKnown RBP2.59□□□□□ -1.99
HMGB1P24-202ENST00000615653 CAPN7Q9Y6W3 813 aa2.59□□□□□ -1.99
HMGB1P24-202ENST00000615653 WDR81Q562E7 1941 aa2.59□□□□□ -1.99
HMGB1P24-202ENST00000615653 IGSF1Q8N6C5 1336 aa2.59□□□□□ -2
HMGB1P24-202ENST00000615653 SAA2-SAA4A0A096LPE2 208 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 A0A0U1RQF3 1178 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 TRBC2A0A5B9 178 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 TYW5A2RUC4 315 aaKnown RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 CPED1A4D0V7 1026 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 A4D1N5 150 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 LIPT2A6NK58 231 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 FAM90A7PA6NKC0 464 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 SH2D7A6NKC9 451 aaPredicted RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 FAM90A22PA8MWA6 464 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 FAM90A12PA8MX19 464 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 FAM90A23PA8MXZ1 464 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 TMCO5BA8MYB1 307 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 H0YIV9 168 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 SLC33A1O00400 549 aaPredicted RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 CTDSP2O14595 271 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 PER2O15055 1255 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 SCAMP1O15126 338 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 BUB1O43683 1085 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 ENTPD3O75355 529 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 S100A9P06702 114 aaKnown RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 TPM3P06753 285 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 ACTN1P12814 892 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 SRCP12931 536 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 CSF2RAP15509 400 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 PDGFRAP16234 1089 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 SRD5A1P18405 259 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 CCNA2P20248 432 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 CASTP20810 708 aaKnown RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 TCEA1P23193 301 aaKnown RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 MCM3P25205 808 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 RYKP34925 604 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 SOX6P35712 828 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 NRIP1P48552 1158 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 HSD17B4P51659 736 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 STAT2P52630 851 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 ATXN3P54252 364 aaPredicted RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 VCPP55072 806 aaKnown RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 CDH8P55286 799 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 EIF3BP55884 814 aaKnown RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 PRKCEQ02156 737 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 TROAPQ12815 778 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 GRSF1Q12849 480 aaKnown RBP eCLIP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 ITGA7Q13683 1181 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 RUNX2Q13950 521 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 DHX34Q14147 1143 aaKnown RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 TWISTNBQ3B726 338 aaPredicted RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 RAB41Q5JT25 222 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 KCNT1Q5JUK3 1230 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 AP1ARQ63HQ0 302 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 KLC3Q6P597 504 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 C17orf99Q6UX52 265 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 UNQ6126/PRO20091Q6UXV3 157 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 LINC00696Q6ZRV3 163 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 SHFQ7M4L6 423 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 ADCK2Q7Z695 626 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 MTERF4Q7Z6M4 381 aaKnown RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 GLRX5Q86SX6 157 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 HOOK3Q86VS8 718 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 TICAM1Q8IUC6 712 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 CNTROBQ8N137 903 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 SIX6OS1Q8N1H7 587 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 SCML4Q8N228 414 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 WDTC1Q8N5D0 677 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 ATAD1Q8NBU5 361 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 BBOF1Q8ND07 529 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 Q8NFD4 153 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 TNIP2Q8NFZ5 429 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 URGCPQ8TCY9 931 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 SECTM1Q8WVN6 248 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 KCNE4Q8WWG9 221 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 SLC13A3Q8WWT9 602 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 SLC5A11Q8WWX8 675 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 RAPGEF5Q92565 580 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 PRCCQ92733 491 aaPredicted RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 SNAPC3Q92966 411 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 NRBF2Q96F24 287 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 EEF2KMTQ96G04 330 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 PDLIM5Q96HC4 596 aaKnown RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 ERO1AQ96HE7 468 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 C1orf74Q96LT6 269 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 FER1L6-AS2Q96M78 137 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 CFAP57Q96MR6 1250 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 CMTM3Q96MX0 182 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 ZNF396Q96N95 335 aaPredicted RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 GCNAQ96QF7 691 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 GAL3ST4Q96RP7 486 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 PKP4Q99569 1192 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 SLC39A3Q9BRY0 314 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 MLPHQ9BV36 600 aaPredicted RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 INTS2Q9H0H0 1204 aaKnown RBP2.58□□□□□ -2
HMGB1P24-202ENST00000615653 HSD3B7Q9H2F3 369 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 TAOK3Q9H2K8 898 aa2.58□□□□□ -2
HMGB1P24-202ENST00000615653 EBF2Q9HAK2 575 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms