RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 CBR4Q8N4T8 237 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 OR2L5Q8NG80 312 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 OR4C6Q8NH72 309 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 METTL21AQ8WXB1 218 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 CST11Q9H112 138 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 C1orf109Q9NX04 203 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 MARK1Q9P0L2 795 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 CNTN3Q9P232 1028 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 ABI3Q9P2A4 366 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 SMIM28A0A1B0GU29 152 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ANXA2P2A6NMY6 339 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TSPAN9O75954 239 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 CXCL14O95715 111 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ANXA2P07355 339 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 VARSP26640 1264 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 SLC7A1P30825 629 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 HOXC12P31275 282 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 RPL19P84098 196 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 SEMA5AQ13591 1074 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 AKIRIN2Q53H80 203 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 FRRS1Q6ZNA5 592 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ZNF527Q8NB42 609 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 FBXO22Q8NEZ5 403 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 FATE1Q969F0 183 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 FEM1CQ96JP0 617 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TTYH3Q9C0H2 523 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 C11orf16Q9NQ32 467 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 C14orf105Q9NVL8 296 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ZIM2Q9NZV7 527 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 NOCTQ9UK39 431 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 STXBP5LQ9Y2K9 1186 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TBC1D3DA0A087WVF3 549 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TBC1D3IA0A087WXS9 549 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TBC1D3EA0A087X179 549 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TBC1D3KA0A087X1G2 549 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TBC1D3FA6NER0 549 aaPredicted RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 TBC1D3LB9A6J9 549 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TBC1D3HP0C7X1 549 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ZBTB48P10074 688 aaPredicted RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 OR1D2P34982 312 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 GNALP38405 381 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ASPAP45381 313 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 DUSP4Q13115 394 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ZBTB6Q15916 424 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ARL13AQ5H913 290 aaPredicted RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 LPCAT4Q643R3 524 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TBC1D3GQ6DHY5 549 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TBC1D3CQ6IPX1 549 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 NUP54Q7Z3B4 507 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ANKS1BQ7Z6G8 1248 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 PIGWQ7Z7B1 504 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ADGRG6Q86SQ4 1221 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 AMIGO1Q86WK6 493 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TBC1D3Q8IZP1 549 aaPredicted RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 CFAP52Q8N1V2 620 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 VANGL1Q8TAA9 524 aaPredicted RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 SNIP1Q8TAD8 396 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 C11orf24Q96F05 449 aaPredicted RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 ZNF570Q96NI8 536 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 LRRC3Q9BY71 257 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 SLC29A3Q9BZD2 475 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 DNAJB9Q9UBS3 223 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 MKLN1Q9UL63 735 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 RPL36Q9Y3U8 105 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 MRPL42Q9Y6G3 142 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 ARL5CA6NH57 179 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 CAPN8A6NHC0 703 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TLX3O43711 291 aaPredicted RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 S100A6P06703 90 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 SP100P23497 879 aaPredicted RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 ACVR2AP27037 513 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 AP1S2P56377 157 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ERVK-8P63133 956 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 PLEKHG6Q3KR16 790 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 SAPCD2Q86UD0 394 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 RALGPS2Q86X27 583 aaPredicted RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 CLHC1Q8NHS4 586 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 KCTD13Q8WZ19 329 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 SLC35G5Q96KT7 338 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 CIB1Q99828 191 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 BRINP2Q9C0B6 783 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 SP140LQ9H930 580 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TRIM39Q9HCM9 518 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 MICAL3Q7RTP6 2002 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ATP6AP2A0A1C7CYW4 349 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ZNF99A8MXY4 864 aaPredicted RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 ATP6AP2O75787 350 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 FAM155BO75949 473 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 APOC1P02654 83 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ALPPP05187 535 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 BLMHQ13867 455 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 KLHL26Q53HC5 615 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 CERS5Q8N5B7 392 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 DQX1Q8TE96 717 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 DNAJA4Q8WW22 397 aaPredicted RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 GEMIN6Q8WXD5 167 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 NTAN1Q96AB6 310 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 CPNE2Q96FN4 548 aaPredicted RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 ANKRA2Q9H9E1 313 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 EQTNQ9NQ60 294 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms