RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 SKA2Q8WVK7 121 aaPredicted RBP14.4□□□□□ -0.1
CD48-203ENST00000613788 TCEAL3Q969E4 200 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 PDLIM5Q96HC4 596 aaKnown RBP14.4□□□□□ -0.1
CD48-203ENST00000613788 VPS11Q9H270 941 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 SEMA4GQ9NTN9 838 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 ZNF446Q9NWS9 450 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 SENP1Q9P0U3 644 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 PCOLCE2Q9UKZ9 415 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 VPS13AQ96RL7 3174 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 A0A1W2PPM1 405 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 LNP1A1A4G5 178 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 OR5K4A6NMS3 321 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 AGPSO00116 658 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 WISP3O95389 354 aaPredicted RBP14.39□□□□□ -0.11
CD48-203ENST00000613788 SLC35E2BP0CK96 405 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 CCDC166P0CW27 439 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 MPC1LP0DKB6 136 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 COL6A2P12110 1019 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 SLC2A4P14672 509 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 RPL10P27635 214 aaKnown RBP14.39□□□□□ -0.11
CD48-203ENST00000613788 PDHA2P29803 388 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 MAPK9P45984 424 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 CSRP3P50461 194 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 PGGT1BP53609 377 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 SEPT7Q16181 437 aaKnown RBP14.39□□□□□ -0.11
CD48-203ENST00000613788 UAP1L1Q3KQV9 507 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 PPM1JQ5JR12 505 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 TMEM207Q6UWW9 146 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 XKR5Q6UX68 686 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 VRK3Q8IV63 474 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 MYO1HQ8N1T3 1032 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 SLC25A45Q8N413 288 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 MINDY1Q8N5J2 469 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 SAP25Q8TEE9 199 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 LINGO1Q96FE5 620 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 UBXN10Q96LJ8 280 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 TSNARE1Q96NA8 513 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 FOPNLQ96NB1 174 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 WWP1Q9H0M0 922 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 OR52A5Q9H2C5 316 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 CAAP1Q9H8G2 361 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 IL21RQ9HBE5 538 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 TMBIM4Q9HC24 238 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 PRDM8Q9NQV8 689 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 UCKL1Q9NWZ5 548 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 TBC1D29Q9UFV1 150 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 PSMD13Q9UNM6 376 aa14.39□□□□□ -0.11
CD48-203ENST00000613788 PCDHGA12O60330 932 aa14.38□□□□□ -0.11
CD48-203ENST00000613788 SASH3O75995 380 aa14.38□□□□□ -0.11
CD48-203ENST00000613788 CELA2BP08218 269 aaPredicted RBP14.38□□□□□ -0.11
CD48-203ENST00000613788 LTA4HP09960 611 aaKnown RBP14.38□□□□□ -0.11
CD48-203ENST00000613788 ZNF883P0CG24 379 aa14.38□□□□□ -0.11
CD48-203ENST00000613788 ALPPL2P10696 532 aa14.38□□□□□ -0.11
CD48-203ENST00000613788 PYGBP11216 843 aa14.38□□□□□ -0.11
CD48-203ENST00000613788 F3P13726 295 aa14.38□□□□□ -0.11
CD48-203ENST00000613788 IL9RQ01113 521 aa14.38□□□□□ -0.11
CD48-203ENST00000613788 SUZ12Q15022 739 aaKnown RBP14.38□□□□□ -0.11
CD48-203ENST00000613788 SF3A2Q15428 464 aaKnown RBP14.38□□□□□ -0.11
CD48-203ENST00000613788 FAM83EQ2M2I3 478 aa14.38□□□□□ -0.11
CD48-203ENST00000613788 CAPRIN2Q6IMN6 1127 aaKnown RBP14.38□□□□□ -0.11
CD48-203ENST00000613788 PDZD3Q86UT5 571 aa14.38□□□□□ -0.11
CD48-203ENST00000613788 TRABD2AQ86V40 505 aa14.38□□□□□ -0.11
CD48-203ENST00000613788 LCA5Q86VQ0 697 aa14.38□□□□□ -0.11
CD48-203ENST00000613788 ANKRD49Q8WVL7 239 aa14.38□□□□□ -0.11
CD48-203ENST00000613788 ZBTB9Q96C00 473 aa14.38□□□□□ -0.11
CD48-203ENST00000613788 PI4KAP42356 2102 aa14.38□□□□□ -0.11
CD48-203ENST00000613788 PIKFYVEQ9Y2I7 2098 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 KIR2DS5A0A0G2JLQ3 304 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 A0A0G2JNG1 304 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 KIR2DS3K7RE56 304 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 KLHL2O95198 593 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 TSPAN12O95859 305 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 KRT4P19013 534 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 CCT5P48643 541 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 ATP6V0D1P61421 351 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 ABRQ12979 859 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 CSHL1Q14406 222 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 KIR2DS5Q14953 304 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 DEFB133Q30KQ1 61 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 TNFAIP8L3Q5GJ75 292 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 KLC3Q6P597 504 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 IYDQ6PHW0 289 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 CYHR1Q6ZMK1 362 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 SRRM1Q8IYB3 904 aaKnown RBP14.37□□□□□ -0.11
CD48-203ENST00000613788 OR2I1PQ8NGU4 316 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 ZDHHC1Q8WTX9 485 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 TFGQ92734 400 aaPredicted RBP14.37□□□□□ -0.11
CD48-203ENST00000613788 SMC6Q96SB8 1091 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 DUSP23Q9BVJ7 150 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 DERL2Q9GZP9 239 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 NMRAL1Q9HBL8 299 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 PCMTD2Q9NV79 361 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 DNAAF2Q9NVR5 837 aaKnown RBP14.37□□□□□ -0.11
CD48-203ENST00000613788 DCDC2Q9UHG0 476 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 RUVBL2Q9Y230 463 aaKnown RBP14.37□□□□□ -0.11
CD48-203ENST00000613788 WDR37Q9Y2I8 494 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 HEBP2Q9Y5Z4 205 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 LRP4O75096 1905 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 CACNA1EQ15878 2313 aa14.37□□□□□ -0.11
CD48-203ENST00000613788 A6NCN8 305 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms