RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 PLXNB3Q9ULL4 1909 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 LILRA5A6NI73 299 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 FAM159BA6NKW6 160 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 OPA1O60313 960 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 KDM1AO60341 852 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 GPC4O75487 556 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 DKK1O94907 266 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 RPLP0P05388 317 aaKnown RBP12.96□□□□□ -0.33
MDC1-209ENST00000613547 TNFRSF8P28908 595 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 PDHA2P29803 388 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 SLC19A1P41440 591 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 SKIV2L2P42285 1042 aaKnown RBP12.96□□□□□ -0.33
MDC1-209ENST00000613547 EPHA4P54764 986 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 GPLD1P80108 840 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 SPIDRQ14159 915 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 NR1D2Q14995 579 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 PLCL1Q15111 1095 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 N4BP2L1Q5TBK1 243 aaPredicted RBP12.96□□□□□ -0.33
MDC1-209ENST00000613547 CAPRIN2Q6IMN6 1127 aaKnown RBP12.96□□□□□ -0.33
MDC1-209ENST00000613547 FAM45BPQ6NSW5 357 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 KLHL35Q6PF15 583 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 DHRS13Q6UX07 377 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 SPRED1Q7Z699 444 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 SLC22A15Q8IZD6 547 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 GALNT15Q8N3T1 639 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 SPDYE1Q8NFV5 336 aaPredicted RBP12.96□□□□□ -0.33
MDC1-209ENST00000613547 OR10G6Q8NH81 332 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 FAM45AQ8TCE6 357 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 LKAAEAR1Q8TD35 194 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 FBF1Q8TES7 1133 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 ZFPM2Q8WW38 1151 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 TFGQ92734 400 aaPredicted RBP12.96□□□□□ -0.33
MDC1-209ENST00000613547 FAM136AQ96C01 138 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 AHCYL2Q96HN2 611 aaKnown RBP12.96□□□□□ -0.33
MDC1-209ENST00000613547 GFM1Q96RP9 751 aaKnown RBP12.96□□□□□ -0.33
MDC1-209ENST00000613547 CYTH2Q99418 400 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 AARSD1Q9BTE6 412 aaKnown RBP12.96□□□□□ -0.33
MDC1-209ENST00000613547 CDC42EP4Q9H3Q1 356 aaKnown RBP12.96□□□□□ -0.33
MDC1-209ENST00000613547 MVB12BQ9H7P6 319 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 UCK1Q9HA47 277 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 SLC40A1Q9NP59 571 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 LATS2Q9NRM7 1088 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 TAS2R13Q9NYV9 303 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 KLHL42Q9P2K6 505 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 SLC17A6Q9P2U8 582 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 TRMT6Q9UJA5 497 aaKnown RBP12.96□□□□□ -0.33
MDC1-209ENST00000613547 ASF1AQ9Y294 204 aa12.96□□□□□ -0.33
MDC1-209ENST00000613547 CFAP54Q96N23 3096 aa12.96□□□□□ -0.34
MDC1-209ENST00000613547 TDRD6O60522 2096 aaKnown RBP12.95□□□□□ -0.34
MDC1-209ENST00000613547 DUX1O43812 170 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 TCEA3O75764 348 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 SLCO2B1O94956 709 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 F7P08709 466 aaPredicted RBP12.95□□□□□ -0.34
MDC1-209ENST00000613547 MCM3P25205 808 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 GABRB3P28472 473 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 ATP5DP30049 168 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 CLPPQ16740 277 aaPredicted RBP12.95□□□□□ -0.34
MDC1-209ENST00000613547 KBTBD12Q3ZCT8 623 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 AMZ1Q400G9 498 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 LRRC8EQ6NSJ5 796 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 ZNF549Q6P9A3 640 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 TTC23LQ6PF05 361 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 XKR5Q6UX68 686 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 NAPRTQ6XQN6 538 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 TMEM26Q6ZUK4 368 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 TRMT10CQ7L0Y3 403 aaKnown RBP12.95□□□□□ -0.34
MDC1-209ENST00000613547 ERMP1Q7Z2K6 904 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 GPATCH11Q8N954 259 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 VPS39Q96JC1 886 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 FOPNLQ96NB1 174 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 FERD3LQ96RJ6 166 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 NDNQ99608 321 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 CPNE1Q99829 537 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 DPYSL5Q9BPU6 564 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 TRIT1Q9H3H1 467 aaKnown RBP12.95□□□□□ -0.34
MDC1-209ENST00000613547 LRRN3Q9H3W5 708 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 RHOJQ9H4E5 214 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 PSAT1Q9Y617 370 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 CFAP20Q9Y6A4 193 aaKnown RBP12.95□□□□□ -0.34
MDC1-209ENST00000613547 DMXL1Q9Y485 3027 aa12.95□□□□□ -0.34
MDC1-209ENST00000613547 IGHV1OR21-1A0A087WYE8 117 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 ACSL3O95573 720 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 CBSLP0DN79 551 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 ENO3P13929 434 aaPredicted RBP12.94□□□□□ -0.34
MDC1-209ENST00000613547 SPRP35270 261 aaPredicted RBP12.94□□□□□ -0.34
MDC1-209ENST00000613547 CBSP35520 551 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 GP5P40197 560 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 ABCG1P45844 678 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 MAPK9P45984 424 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 RGS4P49798 205 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 CLCN7P51798 805 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 SLC12A2P55011 1212 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 OR1D5P58170 312 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 FOXC1Q12948 553 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 PDAP1Q13442 181 aaKnown RBP12.94□□□□□ -0.34
MDC1-209ENST00000613547 GPR18Q14330 331 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 MAP9Q49MG5 647 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 DUS1LQ6P1R4 473 aaKnown RBP12.94□□□□□ -0.34
MDC1-209ENST00000613547 UNC5DQ6UXZ4 953 aa12.94□□□□□ -0.34
MDC1-209ENST00000613547 RBM44Q6ZP01 1051 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms