RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 TBC1D3CQ6IPX1 549 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 TBC1D3Q8IZP1 549 aaPredicted RBP17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 C1orf127Q8N9H9 656 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 TTLQ8NG68 377 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 UPF1Q92900 1129 aaKnown RBP eCLIP17.18■□□□□ 0.345e-8■■■■■ 36.1
HMGXB3-206ENST00000613459 KLRG1Q96E93 195 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 TBATAQ96M53 351 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 CCDC115Q96NT0 180 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 TRNT1Q96Q11 434 aaKnown RBP17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 RBMX2Q9Y388 322 aaKnown RBP17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 PRAMEF33A0A0G2JMD5 474 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 PRAMEF10O60809 474 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 ANXA8P13928 327 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 SLC18A1P54219 525 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 RIPPLY1Q0D2K3 151 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 PRAMEF19Q5SWL8 479 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 ZNF514Q96K75 400 aaPredicted RBP17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 GATA5Q9BWX5 397 aaPredicted RBP17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 TAPBPLQ9BX59 468 aa17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 EVLQ9UI08 416 aaPredicted RBP17.18■□□□□ 0.34
HMGXB3-206ENST00000613459 KLHL33A6NCF5 533 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 FAM155BO75949 473 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 UGT2B4P06133 528 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 METTL21AQ8WXB1 218 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 TOP1MTQ969P6 601 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 FBXW11Q9UKB1 542 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 AQP4P55087 323 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 PPP3R1P63098 170 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 EIF5AP63241 154 aaKnown RBP17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 DSC2Q02487 901 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 ULK3Q6PHR2 472 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 LIX1Q8N485 282 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 UFD1Q92890 307 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 NTAN1Q96AB6 310 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 RNF19AQ9NV58 838 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 PLIN4Q96Q06 1357 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 PITPNM1O00562 1244 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 GOT2P00505 430 aaKnown RBP17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 MAGP20916 626 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 NT5EP21589 574 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 MPP1Q00013 466 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 CHIT1Q13231 466 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 SPATS1Q496A3 300 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 QSOX2Q6ZRP7 698 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 ADGRG6Q86SQ4 1221 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 C15orf40Q8WUR7 153 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 SLC13A3Q8WWT9 602 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 C14orf105Q9NVL8 296 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 NOCTQ9UK39 431 aaKnown RBP17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 NRG1Q02297 640 aaPredicted RBP17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 HEPHQ9BQS7 1158 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 HTATIP2Q9BUP3 242 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 TPK1Q9H3S4 243 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 EBF2Q9HAK2 575 aa17.17■□□□□ 0.34
HMGXB3-206ENST00000613459 UBXN7O94888 489 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 RPS14P62263 151 aaKnown RBP17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 RBM48Q5RL73 367 aaKnown RBP17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 PIGWQ7Z7B1 504 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 SERPINA9Q86WD7 417 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 CFAP52Q8N1V2 620 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 LRRC20Q8TCA0 184 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 C17orf50Q8WW18 174 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 EFHD2Q96C19 240 aaPredicted RBP17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 TTYH3Q9C0H2 523 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 EBF3Q9H4W6 596 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 HSPA7P48741 367 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 ARPC4P59998 168 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 PARGQ86W56 976 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 WFIKKN2Q8TEU8 576 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 LRRN4Q8WUT4 740 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 TNFAIP8L1Q8WVP5 186 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 SLCO2A1Q92959 643 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 FUBP3Q96I24 572 aaKnown RBP eCLIP17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 MAP10Q9P2G4 905 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 RPL36Q9Y3U8 105 aaKnown RBP17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 TIMM22Q9Y584 194 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 PI15O43692 258 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 NME6O75414 186 aaPredicted RBP17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 RORCP51449 518 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 CRYBG2Q8N1P7 616 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 PRRG4Q9BZD6 226 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 TNKS2Q9H2K2 1166 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 DAOAP59103 153 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 SCRN3Q0VDG4 424 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 KHDC1Q4VXA5 237 aaKnown RBP17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 LINC00471Q8N535 108 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 ZBED6CLQ96FA7 236 aaPredicted RBP17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 NSMCE3Q96MG7 304 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 HAPLN3Q96S86 360 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 CST11Q9H112 138 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 FARSBQ9NSD9 589 aaKnown RBP17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 DNAAF2Q9NVR5 837 aaKnown RBP17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 MAP4K5Q9Y4K4 846 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 PCDHGB1Q9Y5G3 927 aa17.16■□□□□ 0.34
HMGXB3-206ENST00000613459 TLX3O43711 291 aaPredicted RBP17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 FOXM1Q08050 763 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 FATE1Q969F0 183 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 SLC35G5Q96KT7 338 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 ACAT2Q9BWD1 397 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 MIR1-1HGQ9H1L0 117 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms