RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 TCP1P17987 556 aaKnown RBP12.35□□□□□ -0.43
CSTF1-208ENST00000613138 IVDP26440 423 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 CCR7P32248 378 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 CSTF2P33240 577 aaKnown RBP eCLIP12.35□□□□□ -0.43
CSTF1-208ENST00000613138 MLLT3P42568 568 aaPredicted RBP12.35□□□□□ -0.43
CSTF1-208ENST00000613138 NSG1P42857 185 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 ABCG1P45844 678 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 CAPZBP47756 277 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 ITIH4Q14624 930 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 KCNAB1Q14722 419 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 PLCL1Q15111 1095 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 PPP1R7Q15435 360 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 CTSL3PQ5NE16 218 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 HP1BP3Q5SSJ5 553 aaPredicted RBP12.35□□□□□ -0.43
CSTF1-208ENST00000613138 RNASEH2BQ5TBB1 312 aaKnown RBP12.35□□□□□ -0.43
CSTF1-208ENST00000613138 CASC4Q6P4E1 433 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 PACS1Q6VY07 963 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 OTUD6BQ8N6M0 293 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 AVL9Q8NBF6 648 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 ZNF248Q8NDW4 579 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 OR4E2Q8NGC2 313 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 OR5AR1Q8NGP9 310 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 ZNF669Q96BR6 464 aaPredicted RBP12.35□□□□□ -0.43
CSTF1-208ENST00000613138 ELMO2Q96JJ3 720 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 C9orf72Q96LT7 481 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 FERD3LQ96RJ6 166 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 NAP1L3Q99457 506 aaPredicted RBP12.35□□□□□ -0.43
CSTF1-208ENST00000613138 HGH1Q9BTY7 390 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 GALPQ9UBC7 116 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 ASIC3Q9UHC3 531 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 SLC24A2Q9UI40 661 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 ACSL5Q9ULC5 683 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 PLAGL1Q9UM63 463 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 SAR1BQ9Y6B6 198 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 ATMQ13315 3056 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 CCDC88CQ9P219 2028 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 IGHV5-51A0A0C4DH38 117 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 GOLGA6L10A0A0M3HER8 536 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 SLC5A10A0PJK1 596 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 CTAGE9A4FU28 777 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 OR6C74A6NCV1 312 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 HGSO14964 777 aaPredicted RBP12.34□□□□□ -0.43
CSTF1-208ENST00000613138 TTI1O43156 1089 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 EFSO43281 561 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 AP2A2O94973 939 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 POLR2CP19387 275 aaPredicted RBP12.34□□□□□ -0.43
CSTF1-208ENST00000613138 WT1P19544 449 aaPredicted RBP12.34□□□□□ -0.43
CSTF1-208ENST00000613138 MAGEA3P43357 314 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 CDK16Q00536 496 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 EIF3IQ13347 325 aaKnown RBP12.34□□□□□ -0.43
CSTF1-208ENST00000613138 TRA2AQ13595 282 aaKnown RBP eCLIP12.34□□□□□ -0.43
CSTF1-208ENST00000613138 PTK6Q13882 451 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 IZUMO3Q5VZ72 239 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 LRRC69Q6ZNQ3 347 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 NLRP9Q7RTR0 991 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 IGDCC3Q8IVU1 814 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 AGBL5Q8NDL9 886 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 HEXDCQ8WVB3 486 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.34□□□□□ -0.431e-7■■■■■ 35.3
CSTF1-208ENST00000613138 TMEM159Q96B96 161 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 SIGLEC10Q96LC7 697 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 MAP3K3Q99759 626 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 DPYSL5Q9BPU6 564 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 TRIM31Q9BZY9 425 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 KIR3DX1Q9H7L2 352 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 MRM3Q9HC36 420 aaKnown RBP12.34□□□□□ -0.43
CSTF1-208ENST00000613138 SIDT1Q9NXL6 827 aaKnown RBP12.34□□□□□ -0.43
CSTF1-208ENST00000613138 SLC39A1Q9NY26 324 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 SLC17A6Q9P2U8 582 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 RUVBL2Q9Y230 463 aaKnown RBP12.34□□□□□ -0.43
CSTF1-208ENST00000613138 CDYLQ9Y232 598 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 FER1L5A0AVI2 2057 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 CACNA1GO43497 2377 aa12.34□□□□□ -0.43
CSTF1-208ENST00000613138 PCM1Q15154 2024 aa12.33□□□□□ -0.43
CSTF1-208ENST00000613138 ATRXP46100 2492 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 ZCWPW2A0A1B0GU75 182 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 C17orf113A0A1B0GUU1 675 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 UBA6A0AVT1 1052 aaPredicted RBP12.33□□□□□ -0.44
CSTF1-208ENST00000613138 BTN3A3O00478 584 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 DNALI1O14645 258 aaPredicted RBP12.33□□□□□ -0.44
CSTF1-208ENST00000613138 NIPSNAP2O75323 286 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 RASSF9O75901 435 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 ACADLP28330 430 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 FMO4P31512 558 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 KPNA2P52292 529 aaKnown RBP12.33□□□□□ -0.44
CSTF1-208ENST00000613138 EIF3BP55884 814 aaKnown RBP12.33□□□□□ -0.44
CSTF1-208ENST00000613138 CXADRP78310 365 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 C2orf54Q08AI8 447 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 ANKRD20A4Q4UJ75 823 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 CACHD1Q5VU97 1274 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 SYT10Q6XYQ8 523 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 PDZD3Q86UT5 571 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 DENND6AQ8IWF6 608 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 MCUQ8NE86 351 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 OR52E1Q8NGJ3 308 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 WDR83Q9BRX9 315 aaKnown RBP12.33□□□□□ -0.44
CSTF1-208ENST00000613138 KLHL25Q9H0H3 589 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 P2RY12Q9H244 342 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 PLAC1Q9HBJ0 212 aa12.33□□□□□ -0.44
CSTF1-208ENST00000613138 AKAP7Q9P0M2 348 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms