RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 CD63P08962 238 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 NPIPA8P0DM63 369 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 DNAJB1P25685 340 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 SNAPC2Q13487 334 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ZCCHC23Q6ZST2 131 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 SPATA19Q7Z5L4 167 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PTAR1Q7Z6K3 402 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 LHFPL5Q8TAF8 219 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ADAM32Q8TC27 787 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 URGCPQ8TCY9 931 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ARL11Q969Q4 196 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 RNF121Q9H920 327 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 H3BUI4 141 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CDK2AP1O14519 115 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 XPNPEP2O43895 674 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 SLC19A2O60779 497 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 GK2Q14410 553 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 FASTKD3Q14CZ7 662 aaKnown RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 BAIAP2L2Q6UXY1 529 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 DPP9Q86TI2 863 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 OR1M1Q8NGA1 313 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CCM2LQ9NUG4 571 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 SLC28A1O00337 649 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 B4GALT4O60513 344 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 FOXD2O60548 495 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 TFAP2AP05549 437 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ADORA1P30542 326 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CREMQ03060 361 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PTGR1Q14914 329 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 TIGD3Q6B0B8 471 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 IRF2BP2Q7Z5L9 587 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ZER1Q7Z7L7 766 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CARS2Q9HA77 564 aaKnown RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 TJP2Q9UDY2 1190 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 MAGED2Q9UNF1 606 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 KNL1Q8NG31 2342 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 A0A1W2PPM1 405 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 WDR27A2RRH5 827 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 MCIDASD6RGH6 385 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CYP4B1P13584 511 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 SNRPD2P62316 118 aaKnown RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 KCNA10Q16322 511 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF699Q32M78 642 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 INTS5Q6P9B9 1019 aaKnown RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 FAM122BQ7Z309 247 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PAQR7Q86WK9 346 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CARM1Q86X55 608 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CCDC116Q8IYX3 515 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 HSPA12BQ96MM6 686 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 KLHL5Q96PQ7 755 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CEP41Q9BYV8 373 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 COL20A1Q9P218 1284 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 SRRDQ9UH36 339 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CSN2P05814 226 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PTGER2P43116 358 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 MLLT6P55198 1093 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 GPX6P59796 221 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 OSTNP61366 133 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PSPHP78330 225 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PRKD1Q15139 912 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PAMR1Q6UXH9 720 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF438Q7Z4V0 828 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 FIBCD1Q8N539 461 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 COQ3Q9NZJ6 369 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 DNMT3LQ9UJW3 386 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 STAP1Q9ULZ2 295 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 GLYATL1P3A0A0U1RQE8 302 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 GRID2O43424 1007 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 POU2F1P14859 743 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 AXLP30530 894 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 BTDP43251 543 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ASTE1Q2TB18 679 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 USP30Q70CQ3 517 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF567Q8N184 647 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 AKR7LQ8NHP1 331 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 SLC5A11Q8WWX8 675 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 TMIGD2Q96BF3 282 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 TBCBQ99426 244 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ACE2Q9BYF1 805 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ANKEF1Q9NU02 776 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 F5H423 210 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 TPP1O14773 563 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 NDUFS3O75489 264 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 LCKP06239 509 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF35P13682 527 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 EEFSECP57772 596 aaKnown RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 OR6S1Q8NH40 331 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 BTN2A2Q8WVV5 523 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 GIMAP5Q96F15 307 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 OCSTAMPQ9BR26 566 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 CPN2P22792 545 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 OAZ1P54368 228 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 DSG2Q14126 1118 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 DUOXA2Q1HG44 320 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 USP39Q53GS9 565 aaKnown RBP4.88□□□□□ -1.63
VPS13D-213ENST00000613099 ADNP2Q6IQ32 1131 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 GDPGP1Q6ZNW5 385 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 STRADAQ7RTN6 431 aa4.88□□□□□ -1.63
VPS13D-213ENST00000613099 UTP4Q969X6 686 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms