RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 EDDM13A0A1B0GTR0 161 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 LCHNA4D1U4 455 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 FAM149AA5PLN7 773 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 BBIP1A8MTZ0 92 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 HEPACAM2A8MVW5 462 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 FYNP06241 537 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 RPL3P39023 403 aaKnown RBP7.16□□□□□ -1.26
CSDE1-218ENST00000610726 ETV3P41162 512 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 PREPP48147 710 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 CLCNKAP51800 687 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 NEK2P51955 445 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 DSC1Q08554 894 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 EIF2B5Q13144 721 aaKnown RBP7.16□□□□□ -1.26
CSDE1-218ENST00000610726 GSTA3Q16772 222 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 GPAT3Q53EU6 434 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 RAB41Q5JT25 222 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 C9orf64Q5T6V5 341 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 REP15Q6BDI9 236 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 ENPP7Q6UWV6 458 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 BEND5Q7L4P6 421 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 CEP97Q8IW35 865 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 PQLC1Q8N2U9 271 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 NXPE1Q8N323 547 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 OR4A15Q8NGL6 344 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 ZFP28Q8NHY6 868 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 EXOSC8Q96B26 276 aaKnown RBP7.16□□□□□ -1.26
CSDE1-218ENST00000610726 RTP4Q96DX8 246 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 HERC2P3Q9BVR0 1158 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 C1orf109Q9NX04 203 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 CNOT6Q9ULM6 557 aaKnown RBP7.16□□□□□ -1.26
CSDE1-218ENST00000610726 VPS4AQ9UN37 437 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 DUSP12Q9UNI6 340 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 PCDHGA11Q9Y5H2 935 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 LAMB1P07942 1786 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 KIAA1551Q9HCM1 1747 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 URADA6NGE7 173 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 TTC34A8MYJ7 566 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 HOXB2P14652 356 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 ZNF37AP17032 561 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-218ENST00000610726 ATP6V1C1P21283 382 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 AGTR2P50052 363 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 MAPK10P53779 464 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 LIPEQ05469 1076 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 NFATC2Q13469 925 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 TGFBIQ15582 683 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 PTCHD3Q3KNS1 767 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 MTX3Q5HYI7 312 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 SLC8B1Q6J4K2 584 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 CYP2U1Q7Z449 544 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 XAGE5Q8WWM1 108 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 ZNF514Q96K75 400 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-218ENST00000610726 CIB1Q99828 191 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 SLC39A3Q9BRY0 314 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 FBRSL1Q9HCM7 1045 aaKnown RBP7.15□□□□□ -1.26
CSDE1-218ENST00000610726 EQTNQ9NQ60 294 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 EME2A4GXA9 379 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-218ENST00000610726 CAPN8A6NHC0 703 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 FPGTO14772 594 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 PI15O43692 258 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 ATF6P18850 670 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 SLC6A2P23975 617 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 PSMB9P28065 219 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 PRKCQQ04759 706 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 TNK2Q07912 1038 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 DHCR24Q15392 516 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 TRIM40Q6P9F5 258 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 C16orf62Q7Z3J2 963 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 KCNJ9Q92806 393 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 KIAA1191Q96A73 305 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 OTUB2Q96DC9 234 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 POLMQ9NP87 494 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-218ENST00000610726 RPS6KA6Q9UK32 745 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 COPG1Q9Y678 874 aaKnown RBP7.15□□□□□ -1.26
CSDE1-218ENST00000610726 ARAP2Q8WZ64 1704 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 SHANK3Q9BYB0 1731 aa7.15□□□□□ -1.26
CSDE1-218ENST00000610726 GRXCR1A8MXD5 290 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 KLF11O14901 512 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 AURKAO14965 403 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 SOCS5O75159 536 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 KRT75O95678 551 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 S1PR4O95977 384 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 SLC35E2BP0CK96 405 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 NCK1P16333 377 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 ZNF30P17039 623 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 NOS3P29474 1203 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 SLC6A4P31645 630 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 SERPINB10P48595 397 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 DGKEP52429 567 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 MAPK12P53778 367 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 RPL26P61254 145 aaKnown RBP7.15□□□□□ -1.27
CSDE1-218ENST00000610726 RPS14P62263 151 aaKnown RBP7.15□□□□□ -1.27
CSDE1-218ENST00000610726 NFKB2Q00653 900 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 ITPRIPL2Q3MIP1 535 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 ZNF648Q5T619 568 aaPredicted RBP7.15□□□□□ -1.27
CSDE1-218ENST00000610726 ANXA8L1Q5VT79 327 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 FAM129CQ86XR2 697 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 ARHGAP12Q8IWW6 846 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 STX19Q8N4C7 294 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 OR10A6Q8NH74 314 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 WDR48Q8TAF3 677 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms