RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 PKMP14618 531 aaKnown RBP20.08■□□□□ 0.81
SSBP3-216ENST00000610401 SLC13A2Q13183 592 aa20.08■□□□□ 0.81
SSBP3-216ENST00000610401 RAPSNQ13702 412 aa20.08■□□□□ 0.81
SSBP3-216ENST00000610401 CRY1Q16526 586 aa20.08■□□□□ 0.81
SSBP3-216ENST00000610401 MON1AQ86VX9 555 aa20.08■□□□□ 0.81
SSBP3-216ENST00000610401 GKN1Q9NS71 199 aa20.08■□□□□ 0.81
SSBP3-216ENST00000610401 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.08■□□□□ 0.812e-7■■■□□ 14.6
SSBP3-216ENST00000610401 INHBBP09529 407 aa20.08■□□□□ 0.8
SSBP3-216ENST00000610401 HOXC13P31276 330 aa20.08■□□□□ 0.8
SSBP3-216ENST00000610401 SPATA19Q7Z5L4 167 aa20.08■□□□□ 0.8
SSBP3-216ENST00000610401 ZFAND4Q86XD8 727 aa20.08■□□□□ 0.8
SSBP3-216ENST00000610401 RASAL3Q86YV0 1011 aa20.08■□□□□ 0.8
SSBP3-216ENST00000610401 DENND1CQ8IV53 801 aa20.08■□□□□ 0.8
SSBP3-216ENST00000610401 LIX1Q8N485 282 aa20.08■□□□□ 0.8
SSBP3-216ENST00000610401 PSMA8Q8TAA3 256 aa20.08■□□□□ 0.8
SSBP3-216ENST00000610401 NODALQ96S42 347 aa20.08■□□□□ 0.8
SSBP3-216ENST00000610401 HEPHQ9BQS7 1158 aa20.08■□□□□ 0.8
SSBP3-216ENST00000610401 LATS2Q9NRM7 1088 aa20.08■□□□□ 0.8
SSBP3-216ENST00000610401 SMPD4Q9NXE4 827 aa20.08■□□□□ 0.8
SSBP3-216ENST00000610401 ZNF229Q9UJW7 825 aa20.08■□□□□ 0.8
SSBP3-216ENST00000610401 CDH7Q9ULB5 785 aa20.08■□□□□ 0.8
SSBP3-216ENST00000610401 LCHNA4D1U4 455 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 FGF1P05230 155 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 RPS17P08708 135 aaKnown RBP20.07■□□□□ 0.8
SSBP3-216ENST00000610401 ENO2P09104 434 aaPredicted RBP20.07■□□□□ 0.8
SSBP3-216ENST00000610401 FAM163BP0C2L3 166 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 EIF4EBP2Q13542 120 aaPredicted RBP20.07■□□□□ 0.8
SSBP3-216ENST00000610401 TRIP4Q15650 581 aaPredicted RBP20.07■□□□□ 0.8
SSBP3-216ENST00000610401 SYT16Q17RD7 645 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 AFMIDQ63HM1 303 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 SLC7A5P1Q8MH63 180 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 BPIFB1Q8TDL5 484 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 MTRRQ9UBK8 725 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 TSC22D4Q9Y3Q8 395 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 PCDHB9Q9Y5E1 797 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 ZFP37Q9Y6Q3 630 aaPredicted RBP20.07■□□□□ 0.8
SSBP3-216ENST00000610401 C2orf81A6NN90 581 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 HOXD8P13378 290 aaPredicted RBP20.07■□□□□ 0.8
SSBP3-216ENST00000610401 AQP1P29972 269 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 GOLGA7Q7Z5G4 137 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 ADCK1Q86TW2 530 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 ATP6V0D2Q8N8Y2 350 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 MCOLN3Q8TDD5 553 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 NETO1Q8TDF5 533 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 ASB2Q96Q27 587 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 MBOAT4Q96T53 435 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 DERL2Q9GZP9 239 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 TNS1Q9HBL0 1735 aaKnown RBP20.07■□□□□ 0.8
SSBP3-216ENST00000610401 PRDM5Q9NQX1 630 aaPredicted RBP20.07■□□□□ 0.8
SSBP3-216ENST00000610401 TMEM248Q9NWD8 314 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 ERGIC3Q9Y282 383 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 HPCAL1P37235 193 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 EEFSECP57772 596 aaKnown RBP20.07■□□□□ 0.8
SSBP3-216ENST00000610401 IFITM3Q01628 133 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 SF1Q15637 639 aaKnown RBP20.07■□□□□ 0.8
SSBP3-216ENST00000610401 CTSL3PQ5NE16 218 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 NADSYN1Q6IA69 706 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 USP51Q70EK9 711 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 OR7A2PQ8NGA2 310 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 RHEBL1Q8TAI7 183 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 ABCB10Q9NRK6 738 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 PKP3Q9Y446 797 aa20.07■□□□□ 0.8
SSBP3-216ENST00000610401 LOC100130705A0A1B0GUX0 176 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 DGKEP52429 567 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 ATXN7L2Q5T6C5 722 aaPredicted RBP20.06■□□□□ 0.8
SSBP3-216ENST00000610401 PTRHD1Q6GMV3 140 aaKnown RBP20.06■□□□□ 0.8
SSBP3-216ENST00000610401 PYCR2Q96C36 320 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 OR52E6Q96RD3 313 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 DPY30Q9C005 99 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 CRISPLD1Q9H336 500 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 SCUBE2Q9NQ36 999 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 ZNF451Q9Y4E5 1061 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 NDST3O95803 873 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 HLA-DPA1P20036 260 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 HTR1EP28566 365 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 TTKP33981 857 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 CA5AP35218 305 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 SGSHP51688 502 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 ARHGEF7Q14155 803 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 INAQ16352 499 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 KLHDC8BQ8IXV7 354 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 CD200R1Q8TD46 325 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 ADAMTS16Q8TE57 1224 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 RAB2BQ8WUD1 216 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 SH3YL1Q96HL8 342 aaPredicted RBP20.06■□□□□ 0.8
SSBP3-216ENST00000610401 MARCH7Q9H992 704 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 WDR70Q9NW82 654 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 MAGEL2Q9UJ55 1249 aa20.06■□□□□ 0.8
SSBP3-216ENST00000610401 SEC14L2O76054 403 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 ZXDBP98169 803 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 DUSP4Q13115 394 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 TUSC3Q13454 348 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 PROSER1Q86XN7 944 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 PTRH1Q86Y79 214 aaKnown RBP20.05■□□□□ 0.8
SSBP3-216ENST00000610401 RIMKLAQ8IXN7 391 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 SLC13A3Q8WWT9 602 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 CIPCQ9C0C6 399 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 SPC25Q9HBM1 224 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 TRMT13Q9NUP7 481 aaKnown RBP20.05■□□□□ 0.8
SSBP3-216ENST00000610401 GIT1Q9Y2X7 761 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms