RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 PLEKHS1Q5SXH7 462 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 CEP85LQ5SZL2 805 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 DUS1LQ6P1R4 473 aaKnown RBP7.52□□□□□ -1.21
MSH6-211ENST00000606499 LRIG3Q6UXM1 1119 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 RAPH1Q70E73 1250 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 PIWIL4Q7Z3Z4 852 aaKnown RBP7.52□□□□□ -1.21
MSH6-211ENST00000606499 PDZD3Q86UT5 571 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 GKN2Q86XP6 184 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 SLC22A15Q8IZD6 547 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 FSTL5Q8N475 847 aaPredicted RBP7.52□□□□□ -1.21
MSH6-211ENST00000606499 SPATA6LQ8N4H0 392 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 FAM46DQ8NEK8 389 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 EEF1AKMT1Q8WVE0 214 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 ANKRD49Q8WVL7 239 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 ASZ1Q8WWH4 475 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 INPP5DQ92835 1189 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 ISL2Q96A47 359 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 TMEM159Q96B96 161 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 LINGO1Q96FE5 620 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 TSPAN17Q96FV3 270 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 RMDN2Q96LZ7 410 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 TMEM109Q9BVC6 243 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 UNKQ9C0B0 810 aaKnown RBP7.52□□□□□ -1.21
MSH6-211ENST00000606499 OR52A5Q9H2C5 316 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 DPEP2Q9H4A9 486 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 PPCSQ9HAB8 311 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 POPDC3Q9HBV1 291 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 GPAMQ9HCL2 828 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 LATS2Q9NRM7 1088 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 DNAAF2Q9NVR5 837 aaKnown RBP7.52□□□□□ -1.21
MSH6-211ENST00000606499 SCHIP1Q9P0W5 487 aaPredicted RBP7.52□□□□□ -1.21
MSH6-211ENST00000606499 SIRPGQ9P1W8 387 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 LGALS13Q9UHV8 139 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 DOLKQ9UPQ8 538 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 BTBD3Q9Y2F9 522 aa7.52□□□□□ -1.21
MSH6-211ENST00000606499 CFAP20Q9Y6A4 193 aaKnown RBP7.52□□□□□ -1.21
MSH6-211ENST00000606499 COL5A1P20908 1838 aaPredicted RBP7.52□□□□□ -1.21
MSH6-211ENST00000606499 TRBV23OR9-2A0A075B6M9 112 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 A0A096LPK6 155 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 PRAMEF33A0A0G2JMD5 474 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 IQANK1A0A1B0GTG1 560 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 KRT87PA6NCN2 255 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 GOLGA8RI6L899 631 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 TRIM38O00635 465 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 KPNA5O15131 536 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 YKT6O15498 198 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 SASH3O75995 380 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 SLCO2B1O94956 709 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 CCDC166P0CW27 439 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 MYF5P13349 255 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 F3P13726 295 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 KRT15P19012 456 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 TYK2P29597 1187 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 SKIV2L2P42285 1042 aaKnown RBP7.51□□□□□ -1.21
MSH6-211ENST00000606499 HALP42357 657 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 MAGEA12P43365 314 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 MAZP56270 477 aaKnown RBP7.51□□□□□ -1.21
MSH6-211ENST00000606499 IL2P60568 153 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 DLG1Q12959 904 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 ABRQ12979 859 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 RPA4Q13156 261 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 CLCA4Q14CN2 919 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 RASA2Q15283 850 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 AGAP9Q5VTM2 703 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 UGT3A1Q6NUS8 523 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 HDXQ7Z353 690 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 CENPLQ8N0S6 344 aaPredicted RBP7.51□□□□□ -1.21
MSH6-211ENST00000606499 NAGSQ8N159 534 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 RIBC1Q8N443 379 aaPredicted RBP7.51□□□□□ -1.21
MSH6-211ENST00000606499 EID2Q8N6I1 236 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 KYQ8NBH2 561 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 OR4C6Q8NH72 309 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 CFAP61Q8NHU2 1237 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 SLC37A2Q8TED4 501 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 ZDHHC1Q8WTX9 485 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 KCTD4Q8WVF5 259 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 SKA2Q8WVK7 121 aaPredicted RBP7.51□□□□□ -1.21
MSH6-211ENST00000606499 MTBPQ96DY7 904 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 C12orf66Q96MD2 445 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 RUFY1Q96T51 708 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 INSM2Q96T92 566 aaPredicted RBP7.51□□□□□ -1.21
MSH6-211ENST00000606499 ROPN1BQ9BZX4 212 aaPredicted RBP7.51□□□□□ -1.21
MSH6-211ENST00000606499 VPS11Q9H270 941 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 CENPHQ9H3R5 247 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 ROPN1Q9HAT0 212 aaPredicted RBP7.51□□□□□ -1.21
MSH6-211ENST00000606499 TMEM9BQ9NQ34 198 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 IMP3Q9NV31 184 aaKnown RBP7.51□□□□□ -1.21
MSH6-211ENST00000606499 PCMTD2Q9NV79 361 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 NLGN3Q9NZ94 848 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 KLHL42Q9P2K6 505 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 IKZF3Q9UKT9 509 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 PCOLCE2Q9UKZ9 415 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 ACSL5Q9ULC5 683 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 CSNK1G3Q9Y6M4 447 aa7.51□□□□□ -1.21
MSH6-211ENST00000606499 NPEPPSL1A6NEC2 478 aa7.5□□□□□ -1.21
MSH6-211ENST00000606499 NEMP2A6NFY4 417 aa7.5□□□□□ -1.21
MSH6-211ENST00000606499 C4orf47A7E2U8 309 aa7.5□□□□□ -1.21
MSH6-211ENST00000606499 AGPSO00116 658 aa7.5□□□□□ -1.21
MSH6-211ENST00000606499 CDC7O00311 574 aa7.5□□□□□ -1.21
MSH6-211ENST00000606499 BTN3A1O00481 513 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms