RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 COG1Q8WTW3 980 aa23.16■■□□□ 1.3
SSX2IP-209ENST00000603677 SLCO2A1Q92959 643 aa23.16■■□□□ 1.3
SSX2IP-209ENST00000603677 MS4A14Q96JA4 679 aa23.16■■□□□ 1.3
SSX2IP-209ENST00000603677 RMDN2Q96LZ7 410 aa23.16■■□□□ 1.3
SSX2IP-209ENST00000603677 RUNDC3BQ96NL0 473 aa23.16■■□□□ 1.3
SSX2IP-209ENST00000603677 CARD6Q9BX69 1037 aa23.16■■□□□ 1.3
SSX2IP-209ENST00000603677 AP1M1Q9BXS5 423 aa23.16■■□□□ 1.3
SSX2IP-209ENST00000603677 TFB2MQ9H5Q4 396 aaKnown RBP23.16■■□□□ 1.3
SSX2IP-209ENST00000603677 OCIAD1Q9NX40 245 aa23.16■■□□□ 1.3
SSX2IP-209ENST00000603677 NEU2Q9Y3R4 380 aa23.16■■□□□ 1.3
SSX2IP-209ENST00000603677 NBEAQ8NFP9 2946 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 OR5K3A6NET4 321 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 A8MU76 341 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 K7ENP7 123 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 KPNA5O15131 536 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 POLR1CO15160 346 aaPredicted RBP23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 PAMP19021 973 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 ATP1A2P50993 1020 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 RHDQ02161 417 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 PAPD7Q5XG87 772 aaKnown RBP23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 MRNIPQ6NTE8 343 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 INO80CQ6PI98 192 aaPredicted RBP23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 CCDC81Q6ZN84 652 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 RSC1A1Q92681 617 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 WBP1Q96G27 269 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 TGM7Q96PF1 710 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 FCRL4Q96PJ5 515 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 UBL7Q96S82 380 aaPredicted RBP23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 SIDT1Q9NXL6 827 aaKnown RBP23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 FOXJ2Q9P0K8 574 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 RNF14Q9UBS8 474 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 POLG2Q9UHN1 485 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 B3GALT1Q9Y5Z6 326 aa23.15■■□□□ 1.3
SSX2IP-209ENST00000603677 CCDC78A2IDD5 438 aa23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 TLCD2A6NGC4 264 aa23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 PRMT5O14744 637 aaPredicted RBP23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 CD3EAPO15446 510 aaKnown RBP23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 NELFEP18615 380 aaKnown RBP23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 GFERP55789 205 aa23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 PRKAA1Q13131 559 aa23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 MAP7Q14244 749 aa23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 RNF187Q5TA31 235 aaPredicted RBP23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 CACHD1Q5VU97 1274 aa23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 ARMC6Q6NXE6 501 aa23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 PCGF5Q86SE9 256 aa23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 SDCCAG8Q86SQ7 713 aaPredicted RBP23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 SPDYE1Q8NFV5 336 aaPredicted RBP23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 ASZ1Q8WWH4 475 aa23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 TFGQ92734 400 aaPredicted RBP23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 PANX3Q96QZ0 392 aa23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 HRASLS2Q9NWW9 162 aa23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 VPS9D1Q9Y2B5 631 aa23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 TMEM184BQ9Y519 407 aaPredicted RBP23.14■■□□□ 1.29
SSX2IP-209ENST00000603677 SLC5A10A0PJK1 596 aa23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 OR51F1A6NGY5 319 aa23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 SDR42E2A6NKP2 422 aa23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 TK2O00142 265 aa23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 RASSF9O75901 435 aa23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 PRSS56P0CW18 603 aa23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 RPS3P23396 243 aaKnown RBP eCLIP23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 ADARP55265 1226 aaKnown RBP23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 CXADRP78310 365 aa23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 BOP1Q14137 746 aaKnown RBP23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 KIAA0930Q6ICG6 404 aaPredicted RBP23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 IRGCQ6NXR0 463 aa23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 TBC1D21Q8IYX1 336 aa23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 CPT1BQ92523 772 aa23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 ELMO1Q92556 727 aa23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 SLC41A2Q96JW4 573 aa23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 EFHD1Q9BUP0 239 aa23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 SPRY4Q9C004 299 aa23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 SAMD15Q9P1V8 674 aa23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 PCYOX1Q9UHG3 505 aa23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 MRFAP1Q9Y605 127 aa23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 CFAP20Q9Y6A4 193 aaKnown RBP23.13■■□□□ 1.29
SSX2IP-209ENST00000603677 FAM237BA0A1B0GVD1 139 aa23.12■■□□□ 1.29
SSX2IP-209ENST00000603677 MGAT1P26572 445 aa23.12■■□□□ 1.29
SSX2IP-209ENST00000603677 MAP4P27816 1152 aaKnown RBP23.12■■□□□ 1.29
SSX2IP-209ENST00000603677 MANEAQ5SRI9 462 aa23.12■■□□□ 1.29
SSX2IP-209ENST00000603677 SYDE1Q6ZW31 735 aaPredicted RBP23.12■■□□□ 1.29
SSX2IP-209ENST00000603677 LMNTD2Q8IXW0 634 aa23.12■■□□□ 1.29
SSX2IP-209ENST00000603677 LILRA3Q8N6C8 439 aaPredicted RBP23.12■■□□□ 1.29
SSX2IP-209ENST00000603677 FERD3LQ96RJ6 166 aa23.12■■□□□ 1.29
SSX2IP-209ENST00000603677 SYTL2Q9HCH5 934 aa23.12■■□□□ 1.29
SSX2IP-209ENST00000603677 KCND1Q9NSA2 647 aa23.12■■□□□ 1.29
SSX2IP-209ENST00000603677 KLHL3Q9UH77 587 aa23.12■■□□□ 1.29
SSX2IP-209ENST00000603677 PRSS21Q9Y6M0 314 aa23.12■■□□□ 1.29
SSX2IP-209ENST00000603677 H3BMM5 538 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 SMAPO00193 183 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 RPN2P04844 631 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 ACADLP28330 430 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 LEPRP48357 1165 aaKnown RBP23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 GNG11P61952 73 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 ACY1Q03154 408 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 SYTL3Q4VX76 610 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 DNAJC21Q5F1R6 531 aaKnown RBP23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 DNTTIP2Q5QJE6 756 aaKnown RBP23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 ANKS6Q68DC2 871 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 CAND1Q86VP6 1230 aaKnown RBP23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 ZFAND4Q86XD8 727 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms