RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ANKRD20A1Q5TYW2 823 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 PRAMEF17Q5VTA0 474 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 ANKRD20A3Q5VUR7 823 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 CPZQ66K79 652 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 CLEC18BQ6UXF7 455 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 SYVN1Q86TM6 617 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 CARFQ8N187 725 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 SLC38A9Q8NBW4 561 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 CLEC18CQ8NCF0 446 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 OR8K5Q8NH50 307 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 THAP4Q8WY91 577 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 FAM118BQ9BPY3 351 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 CCM2Q9BSQ5 444 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 TLR10Q9BXR5 811 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 FAM96AQ9H5X1 160 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 BTRCQ9Y297 605 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 NBASA2RRP1 2371 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 DOPEY2Q9Y3R5 2298 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 CCDC66A2RUB6 948 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 SLC9B1P1A6NJY1 282 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 KCNN4O15554 427 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 KLK3P07288 261 aaPredicted RBP12.8□□□□□ -0.36
RPS28-204ENST00000602140 RBP3P10745 1247 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 ATP1B2P14415 290 aaPredicted RBP12.8□□□□□ -0.36
RPS28-204ENST00000602140 CDH3P22223 829 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 CTNNA1P35221 906 aaKnown RBP12.8□□□□□ -0.36
RPS28-204ENST00000602140 CD97P48960 835 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 ZNF140P52738 457 aaPredicted RBP12.8□□□□□ -0.36
RPS28-204ENST00000602140 EIF3EP60228 445 aaKnown RBP12.8□□□□□ -0.36
RPS28-204ENST00000602140 CHAF1BQ13112 559 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 MSLNQ13421 630 aaPredicted RBP12.8□□□□□ -0.36
RPS28-204ENST00000602140 SPARCL1Q14515 664 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 DARS2Q6PI48 645 aaKnown RBP12.8□□□□□ -0.36
RPS28-204ENST00000602140 ZNF517Q6ZMY9 492 aaPredicted RBP12.8□□□□□ -0.36
RPS28-204ENST00000602140 ATCAYQ86WG3 371 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 CDKL3Q8IVW4 592 aaPredicted RBP12.8□□□□□ -0.36
RPS28-204ENST00000602140 CCDC170Q8IYT3 715 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 NXPE1Q8N323 547 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 FAM26EQ8N5C1 309 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 ACVR1CQ8NER5 493 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 CCDC110Q8TBZ0 833 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 HM13Q8TCT9 377 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 ULK4Q96C45 1275 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 FERD3LQ96RJ6 166 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 COPS8Q99627 209 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 OSBPL8Q9BZF1 889 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 CHST8Q9H2A9 424 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 SRMSQ9H3Y6 488 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 LATS2Q9NRM7 1088 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 C1GALT1Q9NS00 363 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 POMT2Q9UKY4 750 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 EFR3BQ9Y2G0 817 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 PCDHA3Q9Y5H8 950 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 HEBP2Q9Y5Z4 205 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 LRRK2Q5S007 2527 aa12.8□□□□□ -0.36
RPS28-204ENST00000602140 GSAPA4D1B5 854 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 ARGFXA6NJG6 315 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 CFAP99D6REC4 459 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 MEN1O00255 615 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 CCL22O00626 93 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 PJA2O43164 708 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 STK10O94804 968 aaKnown RBP12.79□□□□□ -0.36
RPS28-204ENST00000602140 ITGALP20701 1170 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 HADHAP40939 763 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 CCL11P51671 97 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 GSDMDP57764 484 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 ABRQ12979 859 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 PLEKHS1Q5SXH7 462 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 IZUMO3Q5VZ72 239 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 DENND5AQ6IQ26 1287 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 LCN10Q6JVE6 187 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 SNX20Q7Z614 316 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 DSELQ8IZU8 1212 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 HEXDCQ8WVB3 486 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 LCN9Q8WX39 176 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 CPT1BQ92523 772 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 CLIP3Q96DZ5 547 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 SPATA13Q96N96 652 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 NRTNQ99748 197 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 TBL1YQ9BQ87 522 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 SLC25A23Q9BV35 468 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 ING2Q9H160 280 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 COG4Q9H9E3 785 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 FANCEQ9HB96 536 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 LUC7LQ9NQ29 371 aaKnown RBP12.79□□□□□ -0.36
RPS28-204ENST00000602140 ACSS2Q9NR19 701 aa12.79□□□□□ -0.36
RPS28-204ENST00000602140 C17orf113A0A1B0GUU1 675 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 RCCD1A6NED2 376 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 TTLL8A6PVC2 850 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 MATN2O00339 956 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 IFRD1O00458 451 aaPredicted RBP12.78□□□□□ -0.36
RPS28-204ENST00000602140 LDB2O43679 373 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 GP1BBP13224 206 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 PRDX3P30048 256 aaKnown RBP12.78□□□□□ -0.36
RPS28-204ENST00000602140 MC4RP32245 332 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 CYLC1P35663 651 aaPredicted RBP12.78□□□□□ -0.36
RPS28-204ENST00000602140 PTGIRP43119 386 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 PREPP48147 710 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 CDKN1CP49918 316 aaPredicted RBP12.78□□□□□ -0.36
RPS28-204ENST00000602140 PGDP52209 483 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms