RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 APLFQ8IW19 511 aaPredicted RBP16.55■□□□□ 0.24
SCAF1-204ENST00000601038 LILRA3Q8N6C8 439 aaPredicted RBP16.55■□□□□ 0.24
SCAF1-204ENST00000601038 OR4E2Q8NGC2 313 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 LRRC45Q96CN5 670 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 ZNF501Q96CX3 271 aaPredicted RBP16.55■□□□□ 0.24
SCAF1-204ENST00000601038 RMDN2Q96LZ7 410 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 COPS8Q99627 209 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 FAM118BQ9BPY3 351 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 TBL1YQ9BQ87 522 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 LATS2Q9NRM7 1088 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 TLK1Q9UKI8 766 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 BTRCQ9Y297 605 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 MAN2B2Q9Y2E5 1009 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 DUSP10Q9Y6W6 482 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 SOWAHDA6NJG2 315 aa16.54■□□□□ 0.24
SCAF1-204ENST00000601038 K7EM74 188 aa16.54■□□□□ 0.24
SCAF1-204ENST00000601038 MATN2O00339 956 aa16.54■□□□□ 0.24
SCAF1-204ENST00000601038 LDB2O43679 373 aa16.54■□□□□ 0.24
SCAF1-204ENST00000601038 SCRG1O75711 98 aa16.54■□□□□ 0.24
SCAF1-204ENST00000601038 IPO7O95373 1038 aaKnown RBP16.54■□□□□ 0.24
SCAF1-204ENST00000601038 POLR2CP19387 275 aaPredicted RBP16.54■□□□□ 0.24
SCAF1-204ENST00000601038 RPS15P62841 145 aaKnown RBP16.54■□□□□ 0.24
SCAF1-204ENST00000601038 TMPRSS15P98073 1019 aa16.54■□□□□ 0.24
SCAF1-204ENST00000601038 PRKAA1Q13131 559 aa16.54■□□□□ 0.24
SCAF1-204ENST00000601038 SEMA5AQ13591 1074 aa16.54■□□□□ 0.24
SCAF1-204ENST00000601038 GPR19Q15760 415 aa16.54■□□□□ 0.24
SCAF1-204ENST00000601038 GPR33Q49SQ1 333 aa16.54■□□□□ 0.24
SCAF1-204ENST00000601038 ZNF517Q6ZMY9 492 aaPredicted RBP16.54■□□□□ 0.24
SCAF1-204ENST00000601038 TMEM126BQ8IUX1 230 aa16.54■□□□□ 0.24
SCAF1-204ENST00000601038 KLHDC8BQ8IXV7 354 aa16.54■□□□□ 0.24
SCAF1-204ENST00000601038 ACVR1CQ8NER5 493 aa16.54■□□□□ 0.24
SCAF1-204ENST00000601038 THAP4Q8WY91 577 aa16.54■□□□□ 0.24
SCAF1-204ENST00000601038 ALG3Q92685 438 aa16.54■□□□□ 0.24
SCAF1-204ENST00000601038 FAM96AQ9H5X1 160 aa16.54■□□□□ 0.24
SCAF1-204ENST00000601038 C1GALT1Q9NS00 363 aa16.54■□□□□ 0.24
SCAF1-204ENST00000601038 IGLV3-16A0A075B6K0 115 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 CYSRT1A8MQ03 144 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 NR1D1P20393 614 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 ARCN1P48444 511 aaKnown RBP16.53■□□□□ 0.24
SCAF1-204ENST00000601038 SPARCL1Q14515 664 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 UGT8Q16880 541 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 AADACL2Q6P093 401 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 ASB18Q6ZVZ8 466 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 SYVN1Q86TM6 617 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 TEX19Q8NA77 164 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 LCN9Q8WX39 176 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 PPM1MQ96MI6 270 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 LRFN5Q96NI6 719 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 RUFY1Q96T51 708 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 OR52A5Q9H2C5 316 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 SRMSQ9H3Y6 488 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 SOHLH2Q9NX45 425 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 ZDHHC3Q9NYG2 299 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 POMT2Q9UKY4 750 aa16.53■□□□□ 0.24
SCAF1-204ENST00000601038 FARSAQ9Y285 508 aaKnown RBP16.53■□□□□ 0.24
SCAF1-204ENST00000601038 TRBV5-4A0A0C4DH59 114 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 SLC9B1P1A6NJY1 282 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 H7C0S8 307 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 CCL22O00626 93 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 KLK3P07288 261 aaPredicted RBP16.52■□□□□ 0.24
SCAF1-204ENST00000601038 CDH3P22223 829 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 MC4RP32245 332 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 CD151P48509 253 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 GSDMDP57764 484 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 GPS2Q13227 327 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 LAMB3Q13751 1172 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 UBAP2LQ14157 1087 aaKnown RBP16.52■□□□□ 0.24
SCAF1-204ENST00000601038 PARP6Q2NL67 630 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 ZNF658BQ4V348 819 aaPredicted RBP16.52■□□□□ 0.24
SCAF1-204ENST00000601038 IZUMO3Q5VZ72 239 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 KCTD11Q693B1 232 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 FBXO38Q6PIJ6 1188 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 LRRC57Q8N9N7 239 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 SLC38A9Q8NBW4 561 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 MR1Q95460 341 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 DNAJC1Q96KC8 554 aaKnown RBP16.52■□□□□ 0.24
SCAF1-204ENST00000601038 FERD3LQ96RJ6 166 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 LACRTQ9GZZ8 138 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 COG4Q9H9E3 785 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 VPS37BQ9H9H4 285 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 FANCEQ9HB96 536 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 SYTL2Q9HCH5 934 aa16.52■□□□□ 0.24
SCAF1-204ENST00000601038 REXO2Q9Y3B8 237 aaKnown RBP16.52■□□□□ 0.24
SCAF1-204ENST00000601038 NBASA2RRP1 2371 aa16.51■□□□□ 0.23
SCAF1-204ENST00000601038 GRID2IPA4D2P6 1211 aa16.51■□□□□ 0.23
SCAF1-204ENST00000601038 IFRD1O00458 451 aaPredicted RBP16.51■□□□□ 0.23
SCAF1-204ENST00000601038 ACRV1P26436 265 aa16.51■□□□□ 0.23
SCAF1-204ENST00000601038 PRDX3P30048 256 aaKnown RBP16.51■□□□□ 0.23
SCAF1-204ENST00000601038 CDKN1CP49918 316 aaPredicted RBP16.51■□□□□ 0.23
SCAF1-204ENST00000601038 RPS18P62269 152 aaKnown RBP16.51■□□□□ 0.23
SCAF1-204ENST00000601038 RPA4Q13156 261 aa16.51■□□□□ 0.23
SCAF1-204ENST00000601038 ZRANB3Q5FWF4 1079 aa16.51■□□□□ 0.23
SCAF1-204ENST00000601038 PLEKHS1Q5SXH7 462 aa16.51■□□□□ 0.23
SCAF1-204ENST00000601038 ZNF449Q6P9G9 518 aa16.51■□□□□ 0.23
SCAF1-204ENST00000601038 ARHGEF18Q6ZSZ5 1173 aa16.51■□□□□ 0.23
SCAF1-204ENST00000601038 SERPINA9Q86WD7 417 aa16.51■□□□□ 0.23
SCAF1-204ENST00000601038 TTC13Q8NBP0 860 aa16.51■□□□□ 0.23
SCAF1-204ENST00000601038 CPT1BQ92523 772 aa16.51■□□□□ 0.23
SCAF1-204ENST00000601038 MRFAP1L1Q96HT8 127 aa16.51■□□□□ 0.23
SCAF1-204ENST00000601038 TLR10Q9BXR5 811 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms