RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 VPS37BQ9H9H4 285 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 UCK1Q9HA47 277 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 VPS9D1Q9Y2B5 631 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 CFAP20Q9Y6A4 193 aaKnown RBP13.43□□□□□ -0.26
VRK3-219ENST00000600137 CEP295Q9C0D2 2601 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 IGHV1OR21-1A0A087WYE8 117 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 FAM221BA6H8Z2 402 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 H3BMM5 538 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 PFDN6O15212 129 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 SLU7O95391 586 aaKnown RBP13.42□□□□□ -0.26
VRK3-219ENST00000600137 ADRB1P08588 477 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 TPBGLP0DKB5 382 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 MTHFD1P11586 935 aaKnown RBP13.42□□□□□ -0.26
VRK3-219ENST00000600137 CDK4P11802 303 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 SLC2A4P14672 509 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 CD9P21926 228 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 GPR3P46089 330 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 PGGT1BP53609 377 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 E2F1Q01094 437 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 DUS1LQ6P1R4 473 aaKnown RBP13.42□□□□□ -0.26
VRK3-219ENST00000600137 TMEM26Q6ZUK4 368 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 TMPRSS7Q7RTY8 843 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 PDZD3Q86UT5 571 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 ZC3HC1Q86WB0 502 aaKnown RBP13.42□□□□□ -0.26
VRK3-219ENST00000600137 RASGRP3Q8IV61 690 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 SLC22A15Q8IZD6 547 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 CACTIN-AS1Q8N1I8 211 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 EIF1ADQ8N9N8 165 aaKnown RBP13.42□□□□□ -0.26
VRK3-219ENST00000600137 PHC3Q8NDX5 983 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 KCNJ9Q92806 393 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 PANX3Q96QZ0 392 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 NRTNQ99748 197 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 TBC1D10AQ9BXI6 508 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 CDC42EP4Q9H3Q1 356 aaKnown RBP13.42□□□□□ -0.26
VRK3-219ENST00000600137 LRRN3Q9H3W5 708 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 PPANQ9NQ55 473 aaKnown RBP13.42□□□□□ -0.26
VRK3-219ENST00000600137 POT1Q9NUX5 634 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 OGFRQ9NZT2 677 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 MTRF1LQ9UGC7 380 aaKnown RBP13.42□□□□□ -0.26
VRK3-219ENST00000600137 DHRS7Q9Y394 339 aa13.42□□□□□ -0.26
VRK3-219ENST00000600137 MED19A0JLT2 244 aaPredicted RBP13.41□□□□□ -0.26
VRK3-219ENST00000600137 RHPN2P1A8MT19 583 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 TNFRSF8P28908 595 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 PDX1P52945 283 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 CSE1LP55060 971 aaKnown RBP13.41□□□□□ -0.26
VRK3-219ENST00000600137 CDKN2DP55273 166 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 PLOD1Q02809 727 aaPredicted RBP13.41□□□□□ -0.26
VRK3-219ENST00000600137 HSPA14Q0VDF9 509 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 BOP1Q14137 746 aaKnown RBP13.41□□□□□ -0.26
VRK3-219ENST00000600137 GPR18Q14330 331 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 KBTBD12Q3ZCT8 623 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 CCDC157Q569K6 752 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 ACSBG2Q5FVE4 666 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 PLEKHS1Q5SXH7 462 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 CYHR1Q6ZMK1 362 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 CCNI2Q6ZMN8 369 aaPredicted RBP13.41□□□□□ -0.26
VRK3-219ENST00000600137 ZNF574Q6ZN55 896 aaPredicted RBP13.41□□□□□ -0.26
VRK3-219ENST00000600137 SLC26A11Q86WA9 606 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 MARCH9Q86YJ5 346 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 Q8N9G6 341 aaPredicted RBP13.41□□□□□ -0.26
VRK3-219ENST00000600137 CD200R1Q8TD46 325 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 FBF1Q8TES7 1133 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 ZFPM2Q8WW38 1151 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 ASZ1Q8WWH4 475 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 TFGQ92734 400 aaPredicted RBP13.41□□□□□ -0.26
VRK3-219ENST00000600137 FAM136AQ96C01 138 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 C12orf66Q96MD2 445 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 NDNQ99608 321 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 TWSG1Q9GZX9 223 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 TSPYL1Q9H0U9 437 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 EPB41L4BQ9H329 900 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 EVA1BQ9NVM1 165 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 ZFATQ9P243 1243 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 KLHL42Q9P2K6 505 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 COMMD10Q9Y6G5 202 aa13.41□□□□□ -0.26
VRK3-219ENST00000600137 KIF26BQ2KJY2 2108 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 LILRA5A6NI73 299 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 F8W8V4 182 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 VIPP01282 170 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 SLC35G4P0C7Q5 338 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 CHRM3P20309 590 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 KCNA4P22459 653 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 ALDH4A1P30038 563 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 HALP42357 657 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 GRB7Q14451 532 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 NKAIN2Q5VXU1 208 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 STRA8Q7Z7C7 330 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 GSPT2Q8IYD1 628 aaKnown RBP13.4□□□□□ -0.26
VRK3-219ENST00000600137 DCBLD1Q8N8Z6 715 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 SIDT2Q8NBJ9 832 aaKnown RBP13.4□□□□□ -0.26
VRK3-219ENST00000600137 TMEM159Q96B96 161 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 SH3KBP1Q96B97 665 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 CXorf40BQ96DE9 158 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 GPR21Q99679 349 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 OLFM1Q99784 485 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 IMP3Q9NV31 184 aaKnown RBP13.4□□□□□ -0.26
VRK3-219ENST00000600137 SLC24A2Q9UI40 661 aa13.4□□□□□ -0.26
VRK3-219ENST00000600137 ATXN7L1Q9ULK2 861 aaPredicted RBP13.4□□□□□ -0.26
VRK3-219ENST00000600137 KPNA5O15131 536 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 HYAL3O43820 417 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms